WormBase Tree Display for Gene: WBGene00019999

WBGene00019999 SMap: S_parent: Sequence: R10H1
  Identity: Version: 2
    Name: CGC_name: srab-14 Person_evidence: WBPerson1482
      Sequence_name: R10H1.2
      Molecular_name: R10H1.2
        R10H1.2.1
        CE53785
      Other_name: CELE_R10H1.2 Accession_evidence: NDB BX284602
      Public_name: srab-14
    DB_info: Database: WormQTL gene WBGene00019999
        WormFlux gene WBGene00019999
        NDB locus_tag CELE_R10H1.2
        Panther gene CAEEL|WormBase=WBGene00019999|UniProtKB=Q09344
          family PTHR46561
        NCBI gene 187787
        RefSeq protein NM_001027109.4
        SwissProt UniProtAcc Q09344
        UniProt_GCRP UniProtAcc Q09344
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 06 Jan 2005 11:57:14 WBPerson2970 Name_change: CGC_name: srab-14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srab
    Allele (36)
    RNASeq_FPKM (74)
    Ortholog (25)
    Paralog (42)
    Structured_description: Automated_description: Expressed in ASEL and ASER. Is predicted to encode a protein with the following domains: Serpentine type 7TM GPCR receptor class ab chemoreceptor; Phosphorylation site; and 7TM GPCR, serpentine receptor class ab (Srab). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R10H1.2
    Corresponding_CDS_history: R10H1.2:wp112
      R10H1.2:wp140
      R10H1.2a:wp274
      R10H1.2b:wp274
    Corresponding_transcript: R10H1.2.1
    Other_sequence (22)
    Associated_feature: WBsf988463
      WBsf1012545
  Experimental_info: RNAi_result: WBRNAi00051735 Inferred_automatically: RNAi_primary
      WBRNAi00034833 Inferred_automatically: RNAi_primary
      WBRNAi00017726 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6497
      Expr7918
      Expr1014210
      Expr1155400
      Expr2016161
      Expr2034392
    Drives_construct: WBCnstr00003716
      WBCnstr00012993
      WBCnstr00025440
    Construct_product: WBCnstr00025440
    Microarray_results (24)
    Expression_cluster: WBPaper00035211:age-1_vs_age-1_downregulated
      WBPaper00037950:dopaminergic-neurons_embryo_enriched
      WBPaper00037950:excretory-cell_larva_enriched
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050496:RID_enriched
      WBPaper00050496:unc-39(hp701)_regulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055226:adr-1(tm668)_upregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059754:C.neoformans_H99_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:AIM
      WBPaper00061340:AVB
      WBPaper00061340:DVA
      WBPaper00061340:Excretory_duct_and_pore
      WBPaper00061340:g1P
      WBPaper00061340:hyp1_hyp2
      WBPaper00061340:RIS
      WBPaper00061340:URX
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061527:ckr-1-T09B9.3
      WBPaper00061651:ALN_enriched
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065560:E.coli-HB101_downregulated_F3
      WBPaper00065841:17_0
      WBPaper00065841:28_0
      WBPaper00065841:29_0
      WBPaper00065841:51_0
      WBPaper00065841:56_0
      WBPaper00065841:60_0
      WBPaper00065841:62_0
      WBPaper00065841:67_0
      WBPaper00065841:83_0
      WBPaper00065841:87_0
      WBPaper00065841:92_0
      WBPaper00065841:95_0
      WBPaper00065841:104_0
      WBPaper00065841:126_0
      WBPaper00065841:130_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_10
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00032948:StarveUp1
      WBPaper00034739:N2moreDR1350
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction: WBInteraction000112143
      WBInteraction000247173
      WBInteraction000285791
      WBInteraction000305524
      WBInteraction000307393
      WBInteraction000403562
      WBInteraction000420225
      WBInteraction000436400
      WBInteraction000462429
  Map_info: Map: II Position: 0.503485 Error: 2.6e-05
    Positive: Positive_clone: R10H1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00024667
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene