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WormBase Tree Display for Gene: WBGene00023502

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Name Class

WBGene00023502SMapS_parentSequenceF08G5
IdentityVersion2
NameCGC_nameclec-184Person_evidenceWBPerson2531
Sequence_nameF08G5.7
Molecular_nameF08G5.7
F08G5.7.1
CE45006
Other_nameCELE_F08G5.7Accession_evidenceNDBBX284604
Public_nameclec-184
DB_infoDatabaseAceViewgene4N199
WormFluxgeneWBGene00023502
NDBlocus_tagCELE_F08G5.7
PanthergeneCAEEL|WormBase=WBGene00023502|UniProtKB=Q5WRN9
familyPTHR22802
NCBIgene3564777
RefSeqproteinNM_001027951.4
TREEFAMTREEFAM_IDTF316838
TrEMBLUniProtAccQ5WRN9
UniProt_GCRPUniProtAccQ5WRN9
SpeciesCaenorhabditis elegans
HistoryVersion_change126 Aug 2004 11:50:57WBPerson1846EventSplit_fromWBGene00008583
209 Oct 2007 15:40:27WBPerson2970Name_changeCGC_nameclec-184
Split_fromWBGene00008583
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (61)
RNASeq_FPKM (74)
GO_annotation00081464
00081465
Ortholog (16)
Paralog (23)
Structured_descriptionAutomated_descriptionPredicted to enable carbohydrate binding activity. Predicted to be located in external side of plasma membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF08G5.7
Corresponding_CDS_historyF08G5.7:wp167
F08G5.7:wp214
Corresponding_transcriptF08G5.7.1
Other_sequencePSC00897_1
GW408082.1
Associated_featureWBsf229293
Experimental_infoRNAi_resultWBRNAi00044056Inferred_automaticallyRNAi_primary
WBRNAi00012931Inferred_automaticallyRNAi_primary
Expr_patternExpr1020299
Expr1148023
Expr2010102
Drives_constructWBCnstr00023850
Construct_productWBCnstr00023850
Microarray_results (17)
Expression_clusterWBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00044656:tatn-1(qd182)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00048971:daf-16(mgDf50)_upregulated_L1
WBPaper00049489:AMsh-glia_enriched
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
WBPaper00049954:BPA_downregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053888:drh-3(rrr2)_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055648:nerve-ring_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056997:NMAD-1_interacting
WBPaper00058948:PA14_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:F40F8.4-C33G8.4
WBPaper00062193:daf-16(RNAi)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062590:Aging_downregulated_body-wall-muscle
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065841:45_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00005124:estrogen_10-5M_regulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00036286:Pattern_G
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00057098:SiO2-nanoparticles_downregulated
InteractionWBInteraction000562780
Map_infoMapIVPosition5.92803Error0.001516
PositivePositive_cloneF08G5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene