WormBase Tree Display for Gene: WBGene00044313

WBGene00044313 SMap: S_parent: Sequence: M02D8
  Identity: Version: 1
    Name: Sequence_name: M02D8.7
      Molecular_name: M02D8.7
        M02D8.7.1
        CE50530
      Other_name: CELE_M02D8.7 Accession_evidence: NDB BX284606
      Public_name: M02D8.7
    DB_info: Database: AceView gene M02D8.7
        WormFlux gene WBGene00044313
        NDB locus_tag CELE_M02D8.7
        NCBI gene 3565914
        RefSeq protein NM_001029629.5
        TrEMBL UniProtAcc Q4TTA8
        UniProt_GCRP UniProtAcc Q4TTA8
    Species: Caenorhabditis elegans
    History: Version_change: 1 21 Apr 2005 09:44:29 WBPerson1867 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (51)
    RNASeq_FPKM (74)
    Ortholog: WBGene00065555 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      CSP28.g11700 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23552 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP39.g19967 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10947 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_02086 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025240 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_X0171900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19637 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00127564 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in neurons and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and eat-2 based on microarray and RNA-seq studies. Is affected by Acrylamide and nitroguanidine based on microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M02D8.7
    Corresponding_CDS_history: M02D8.7:wp247
    Corresponding_transcript: M02D8.7.1
    Associated_feature: WBsf1006229
      WBsf1006230
  Experimental_info: RNAi_result: WBRNAi00017124 Inferred_automatically: RNAi_primary
      WBRNAi00050815 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018605
      Expr1154512
      Expr2005153
      Expr2023373
    Drives_construct: WBCnstr00023637
    Construct_product: WBCnstr00023637
    Microarray_results (12)
    Expression_cluster: WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00050231:male_enriched
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055103:thoc-5(wy822)_upregulated
      WBPaper00055226:adr-1(tm668)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00057068:ints-4(RNAi)_upregulated
      WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:hypoxia_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:ASI
      WBPaper00061340:ASJ
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
      WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00065005:sams-3(RNAi)_upregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00065158:AFD_enriched
      WBPaper00065841:35_0
      WBPaper00065841:35_2
      WBPaper00065841:35_3
      WBPaper00065841:77_0
      WBPaper00065841:106_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_4
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031184:acrylamide_upregulated
      WBPaper00055899:nitroguanidine_regulated
      [cgc6390]:Cluster_C
  Map_info: Positive: Positive_clone: M02D8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 0.329627
  Method: Gene