WormBase Tree Display for Gene: WBGene00001827
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| WBGene00001827 | SMap | S_parent | Sequence | C46A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hcf-1 | |||||||
| Sequence_name | C46A5.9 | ||||||||
| Molecular_name | C46A5.9 | ||||||||
| C46A5.9.1 | |||||||||
| CE26914 | |||||||||
| Other_name | CELE_C46A5.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | hcf-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hcf | ||||||||
| Allele (41) | |||||||||
| Strain | WBStrain00031490 | ||||||||
| WBStrain00040638 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00010776 | ||||||||
| 00010777 | |||||||||
| 00010778 | |||||||||
| 00010779 | |||||||||
| 00010780 | |||||||||
| 00010781 | |||||||||
| 00010782 | |||||||||
| 00010783 | |||||||||
| 00010784 | |||||||||
| 00010785 | |||||||||
| 00010786 | |||||||||
| 00010787 | |||||||||
| 00010788 | |||||||||
| 00010789 | |||||||||
| 00010790 | |||||||||
| 00010791 | |||||||||
| 00010792 | |||||||||
| 00010793 | |||||||||
| 00010794 | |||||||||
| 00010795 | |||||||||
| 00010796 | |||||||||
| 00010797 | |||||||||
| 00010798 | |||||||||
| 00010799 | |||||||||
| 00010800 | |||||||||
| 00010801 | |||||||||
| 00010802 | |||||||||
| 00010803 | |||||||||
| 00010804 | |||||||||
| 00010805 | |||||||||
| 00010806 | |||||||||
| 00010807 | |||||||||
| 00010808 | |||||||||
| Contained_in_operon | CEOP4614 | ||||||||
| Ortholog (44) | |||||||||
| Paralog | WBGene00009978 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00013461 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021751 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:0111814 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4839) | ||||
| Molecular_info | Corresponding_CDS | C46A5.9 | |||||||
| Corresponding_transcript | C46A5.9.1 | ||||||||
| Other_sequence (31) | |||||||||
| Associated_feature | WBsf651947 | ||||||||
| WBsf651948 | |||||||||
| WBsf230320 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00088935 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042584 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081844 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108478 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081815 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062165 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081891 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012019 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081780 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108483 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00005314 | ||||||||
| WBCnstr00009024 | |||||||||
| WBCnstr00009025 | |||||||||
| WBCnstr00036664 | |||||||||
| Construct_product | WBCnstr00005314 | ||||||||
| WBCnstr00009025 | |||||||||
| WBCnstr00010947 | |||||||||
| WBCnstr00036664 | |||||||||
| Regulate_expr_cluster (17) | |||||||||
| Antibody | WBAntibody00000977 | ||||||||
| WBAntibody00001472 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction (118) | |||||||||
| WBProcess | WBbiopr:00000001 | ||||||||
| Map_info | Map | IV | Position | 3.47224 | Error | 0.000901 | |||
| Positive | Positive_clone | C46A5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4397 | |||||||
| 4935 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (32) | |||||||||
| Remark | Sequence connection from [Liu Y, Hengartner MO, Herr W] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
