WormBase Tree Display for Gene: WBGene00001085
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WBGene00001085 | SMap | S_parent | Sequence | C25G4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | dpy-26 | Person_evidence | WBPerson261 | |||||
Sequence_name | C25G4.5 | ||||||||
Molecular_name | C25G4.5 | ||||||||
C25G4.5.1 | |||||||||
CE08398 | |||||||||
Other_name | CELE_C25G4.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | dpy-26 | ||||||||
DB_info | Database | AceView | gene | 4N212 | |||||
WormQTL | gene | WBGene00001085 | |||||||
WormFlux | gene | WBGene00001085 | |||||||
NDB | locus_tag | CELE_C25G4.5 | |||||||
NCBI | gene | 178196 | |||||||
RefSeq | protein | NM_069977.9 | |||||||
SwissProt | UniProtAcc | G5EGE9 | |||||||
TREEFAM | TREEFAM_ID | TF317844 | |||||||
UniProt_GCRP | UniProtAcc | G5EGE9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dpy | ||||||||
Reference_allele | WBVar00089317 | ||||||||
Allele (97) | |||||||||
Legacy_information | n199mat : XX daughters of n199/+ mothers are maternally rescued weak dumpy phenotype with protruding vulva (ES2) 4% Him; XX daughters of n199/n199 mothers are severely dumpy and Him (2% of brood) or die as embryos or young larvae (98% of XX brood). XO n199 animals are non-dumpy almost wildtype males (ME3). Similar or slightly stronger phenotypes in n199/Df. NA3 (n198 (resembles n199) y6 (weaker phenotypes). | ||||||||
See also n198, n199, y6 | |||||||||
[C.elegansII] n199mat : XX daughters of n199/+ mothers are maternally rescued weak dumpy phenotype with protruding vulva (ES2) 4% Him; XX daughters of n199/n199 mothers are severely dumpy and Him (2% of brood) or die as embryos or young larvae (98% of XX brood). XO n199 animals are non-dumpy almost wildtype males (ME3). Similar or slightly stronger phenotypes in n199/Df. OA3: n198 (resembles n199), y6 (weaker phenotypes), y65. Cloned: encodes predicted 1263 aa novel protein; antibody staining indicates DPY-26 associated with X chromosomes in XX, diffuse nuclear in XO. [Plenefisch et al. 1989; TY] | |||||||||
Strain | WBStrain00004455 | ||||||||
WBStrain00004613 | |||||||||
WBStrain00004619 | |||||||||
WBStrain00004623 | |||||||||
WBStrain00034748 | |||||||||
WBStrain00054695 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Contained_in_operon | CEOP4516 | ||||||||
Ortholog (18) | |||||||||
Structured_description | Concise_description | dpy-26 encodes a novel, acidic protein that is highly conserved in other Caenorhabditis species; during development, dpy-26 activity is required for both dosage compensation and meiotic chromosome segregation; DPY-26 localizes to all meiotic chromosomes in the germline and to the hermaphrodite X chromosomes in somatic cells; SDC-1, SDC-2, and SDC-3 proteins form a complex and these three proteins, in turn, colocalize with DPY-26, DPY-27, and MIX-1 proteins both on the X chromosome and on a transgenic her-1(+) array. | Paper_evidence | WBPaper00002605 | |||||
WBPaper00002606 | |||||||||
WBPaper00005215 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 21 May 2007 00:00:00 | ||||||||
Automated_description | Involved in dosage compensation by hypoactivation of X chromosome; meiotic sister chromatid segregation; and mitotic sister chromatid segregation. Located in condensed nuclear chromosome. Part of dosage compensation complex. Expressed widely. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C25G4.5 | |||||||
Corresponding_transcript | C25G4.5.1 | ||||||||
Other_sequence | U43562 | ||||||||
CBC04037_1 | |||||||||
CR05839 | |||||||||
CRC11903_1 | |||||||||
PPC12755_1 | |||||||||
CBC13777_1 | |||||||||
CBC01161_1 | |||||||||
CRC07128_1 | |||||||||
Associated_feature | WBsf652298 | ||||||||
WBsf668431 | |||||||||
WBsf231021 | |||||||||
WBsf231022 | |||||||||
WBsf231023 | |||||||||
Experimental_info | RNAi_result | WBRNAi00041214 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011181 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080293 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080269 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080286 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080273 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080282 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1570 | ||||||||
Expr9851 | |||||||||
Expr1022687 | |||||||||
Expr1030690 | |||||||||
Expr1145250 | |||||||||
Expr1200198 | |||||||||
Expr2011067 | |||||||||
Expr2029304 | |||||||||
Drives_construct | WBCnstr00037090 | ||||||||
Construct_product | WBCnstr00037090 | ||||||||
Antibody | WBAntibody00000131 | ||||||||
WBAntibody00000807 | |||||||||
WBAntibody00000808 | |||||||||
WBAntibody00001591 | |||||||||
WBAntibody00001964 | |||||||||
WBAntibody00002034 | |||||||||
WBAntibody00002040 | |||||||||
WBAntibody00002734 | |||||||||
Microarray_results (23) | |||||||||
Expression_cluster (104) | |||||||||
Interaction | WBInteraction000000005 | ||||||||
WBInteraction000000137 | |||||||||
WBInteraction000000413 | |||||||||
WBInteraction000000446 | |||||||||
WBInteraction000002540 | |||||||||
WBInteraction000002541 | |||||||||
WBInteraction000003068 | |||||||||
WBInteraction000003108 | |||||||||
WBInteraction000004502 | |||||||||
WBInteraction000005629 | |||||||||
WBInteraction000005630 | |||||||||
WBInteraction000028498 | |||||||||
WBInteraction000028750 | |||||||||
WBInteraction000030355 | |||||||||
WBInteraction000030367 | |||||||||
WBInteraction000030368 | |||||||||
WBInteraction000030369 | |||||||||
WBInteraction000030370 | |||||||||
WBInteraction000030371 | |||||||||
WBInteraction000051397 | |||||||||
WBInteraction000051401 | |||||||||
WBInteraction000052069 | |||||||||
WBInteraction000052289 | |||||||||
WBInteraction000126127 | |||||||||
WBInteraction000126128 | |||||||||
WBInteraction000126423 | |||||||||
WBInteraction000126828 | |||||||||
WBInteraction000126829 | |||||||||
WBInteraction000126913 | |||||||||
WBInteraction000140918 | |||||||||
WBInteraction000165694 | |||||||||
WBInteraction000165695 | |||||||||
WBInteraction000165696 | |||||||||
WBInteraction000166355 | |||||||||
WBInteraction000166460 | |||||||||
WBInteraction000180405 | |||||||||
WBInteraction000185230 | |||||||||
WBInteraction000282725 | |||||||||
WBInteraction000293590 | |||||||||
WBInteraction000298963 | |||||||||
WBInteraction000343839 | |||||||||
WBInteraction000346671 | |||||||||
WBInteraction000351166 | |||||||||
WBInteraction000414805 | |||||||||
WBInteraction000501496 | |||||||||
WBInteraction000501665 | |||||||||
WBInteraction000505163 | |||||||||
WBInteraction000521298 | |||||||||
WBInteraction000540688 | |||||||||
WBInteraction000540708 | |||||||||
WBInteraction000540709 | |||||||||
WBInteraction000540710 | |||||||||
WBInteraction000540711 | |||||||||
WBInteraction000541075 | |||||||||
WBInteraction000541507 | |||||||||
WBInteraction000541508 | |||||||||
WBInteraction000541631 | |||||||||
WBInteraction000542964 | |||||||||
WBInteraction000542968 | |||||||||
WBInteraction000542980 | |||||||||
WBInteraction000542981 | |||||||||
WBInteraction000542983 | |||||||||
WBInteraction000554829 | |||||||||
WBInteraction000555985 | |||||||||
WBInteraction000556021 | |||||||||
WBInteraction000556022 | |||||||||
WBInteraction000556023 | |||||||||
WBInteraction000556026 | |||||||||
WBInteraction000556314 | |||||||||
WBInteraction000556315 | |||||||||
WBInteraction000556316 | |||||||||
WBInteraction000556317 | |||||||||
WBInteraction000556559 | |||||||||
WBInteraction000556563 | |||||||||
WBInteraction000556575 | |||||||||
WBInteraction000559087 | |||||||||
WBInteraction000560769 | |||||||||
WBInteraction000560772 | |||||||||
WBInteraction000561380 | |||||||||
WBInteraction000561382 | |||||||||
WBInteraction000562855 | |||||||||
WBInteraction000562856 | |||||||||
WBInteraction000575070 | |||||||||
WBInteraction000575870 | |||||||||
WBInteraction000578866 | |||||||||
WBInteraction000579967 | |||||||||
WBProcess (2) | |||||||||
Map_info | Map | IV | Position | 5.94177 | Error | 0.00601 | |||
Well_ordered | |||||||||
Positive | Positive_clone | C25G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | 2_point | 648 | |||||||
819 | |||||||||
823 | |||||||||
824 | |||||||||
Multi_point | 568 | ||||||||
569 | |||||||||
570 | |||||||||
764 | |||||||||
765 | |||||||||
766 | |||||||||
767 | |||||||||
1916 | |||||||||
5281 | |||||||||
Landmark_gene | |||||||||
Reference (112) | |||||||||
Method | Gene |