WormBase Tree Display for Gene: WBGene00021132
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| WBGene00021132 | SMap | S_parent | Sequence | W10D9 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | nfyb | ||||||
| Allele (106) | |||||||
| Possibly_affected_by | WBVar02153247 | ||||||
| Strain | WBStrain00029952 | ||||||
| WBStrain00033864 | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation (24) | |||||||
| Contained_in_operon | CEOP2028 | ||||||
| CEOP2686 | |||||||
| Ortholog (26) | |||||||
| Paralog | WBGene00001092 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
| Structured_description | Automated_description | Enables DNA-binding transcription repressor activity. Involved in negative regulation of transcription by RNA polymerase II and tissue development. Located in cytoplasm and perikaryon. Expressed in several structures, including excretory cell; gonad; muscle cell; neurons; and oocyte. Is an ortholog of human NFYB (nuclear transcription factor Y subunit beta). | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | W10D9.4a | |||||
| W10D9.4b | |||||||
| Corresponding_transcript | W10D9.4a.1 | ||||||
| W10D9.4b.1 | |||||||
| Other_sequence (11) | |||||||
| Associated_feature | WBsf665324 | ||||||
| WBsf978558 | |||||||
| WBsf986411 | |||||||
| WBsf986412 | |||||||
| WBsf1011397 | |||||||
| WBsf222605 | |||||||
| Transcription_factor | WBTranscriptionFactor000418 | ||||||
| WBTranscriptionFactor001158 | |||||||
| Experimental_info | RNAi_result | WBRNAi00055089 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00036431 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00107390 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern (13) | |||||||
| Drives_construct | WBCnstr00012302 | ||||||
| WBCnstr00015285 | |||||||
| WBCnstr00043039 | |||||||
| Construct_product | WBCnstr00012302 | ||||||
| Regulate_expr_cluster | WBPaper00060006:nfyb-1(cu13)_downregulated_protein | ||||||
| WBPaper00060006:nfyb-1(cu13)_downregulated_transcript | |||||||
| WBPaper00060006:nfyb-1(cu13)_upregulated_protein | |||||||
| WBPaper00060006:nfyb-1(cu13)_upregulated_transcript | |||||||
| Microarray_results (19) | |||||||
| Expression_cluster (94) | |||||||
| Interaction (72) | |||||||
| Map_info | Map | II | Position | -15.6092 | Error | 0.001075 | |
| Positive | Positive_clone | W10D9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference (13) | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
