WormBase Tree Display for Gene: WBGene00015497

WBGene00015497 Evidence: Paper_evidence: WBPaper00003754
  SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 2
    Name: CGC_name: nhr-76 Person_evidence: WBPerson573
      Sequence_name: C05G6.1
      Molecular_name: C05G6.1
        C05G6.1.1
        CE37476
      Other_name: CELE_C05G6.1 Accession_evidence: NDB BX284604
      Public_name: nhr-76
    DB_info: Database: AceView gene 4B385
        WormQTL gene WBGene00015497
        WormFlux gene WBGene00015497
        NDB locus_tag CELE_C05G6.1
        Panther gene CAEEL|WormBase=WBGene00015497|UniProtKB=Q65CM0
          family PTHR24083
        NCBI gene 182276
        RefSeq protein NM_067560.6
        SwissProt UniProtAcc Q65CM0
        TREEFAM TREEFAM_ID TF317760
        UniProt_GCRP UniProtAcc Q65CM0
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 30 Nov 2004 16:48:19 WBPerson2970 Event: Acquires_merge: WBGene00003666
      Acquires_merge: WBGene00003666
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Laboratory: PY
    Allele (158)
    RNASeq_FPKM (74)
    GO_annotation (20)
    Ortholog (34)
    Paralog (250)
    Structured_description: Automated_description: Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in positive regulation of fatty acid beta-oxidation by octopamine signaling pathway; positive regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway; and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in several structures, including body wall musculature; excretory gland cell; intestine; pharynx; and vulval muscle. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C05G6.1
    Corresponding_CDS_history: C05G6.1:wp102
      C05G6.1:wp131
    Corresponding_transcript: C05G6.1.1
    Other_sequence: GO250325.1
      CJC14094_1
    Associated_feature (15)
    Gene_product_binds: WBsf977574
      WBsf977575
      WBsf977578
      WBsf977579
      WBsf977580
      WBsf977582
      WBsf977584
      WBsf977585
      WBsf977586
      WBsf977587
      WBsf977588
      WBsf977590
      WBsf977593
      WBsf977594
      WBsf977595
      WBsf977596
      WBsf977599
      WBsf977600
      WBsf977601
      WBsf977602
      WBsf977603
      WBsf977605
      WBsf977606
      WBsf977607
      WBsf977608
      WBsf977609
      WBsf977610
      WBsf977611
      WBsf977613
      WBsf977614
      WBsf977615
      WBsf977616
      WBsf977617
      WBsf977618
      WBsf977620
      WBsf977621
      WBsf977622
      WBsf977623
      WBsf977624
      WBsf977625
      WBsf977626
      WBsf977628
      WBsf977629
      WBsf977630
      WBsf977631
      WBsf977632
      WBsf977636
      WBsf977638
      WBsf977639
      WBsf977643
      WBsf977644
      WBsf977645
      WBsf977646
      WBsf977647
      WBsf977648
      WBsf977649
      WBsf977650
      WBsf977651
      WBsf977652
      WBsf977655
      WBsf977656
      WBsf977657
      WBsf977658
      WBsf977659
      WBsf977660
      WBsf977661
      WBsf977663
      WBsf977664
      WBsf977665
      WBsf977666
      WBsf977667
      WBsf977668
      WBsf977669
      WBsf977670
      WBsf977671
      WBsf977672
      WBsf977673
      WBsf977675
      WBsf977677
      WBsf977678
      WBsf977679
      WBsf977680
      WBsf977681
      WBsf977682
      WBsf977683
      WBsf977684
      WBsf977685
      WBsf977686
      WBsf977689
      WBsf977690
      WBsf977691
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      WBsf977693
      WBsf977694
      WBsf977695
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      WBsf977698
      WBsf977699
      WBsf977700
      WBsf977703
      WBsf977704
      WBsf977705
      WBsf977706
      WBsf977708
      WBsf977709
      WBsf977711
      WBsf977712
      WBsf977713
      WBsf977714
      WBsf977715
      WBsf977718
      WBsf977719
      WBsf977721
      WBsf977723
      WBsf977724
      WBsf977725
      WBsf977726
      WBsf977727
      WBsf977728
      WBsf977729
      WBsf977730
      WBsf977731
      WBsf977732
      WBsf977733
      WBsf977734
      WBsf977736
      WBsf977738
      WBsf977739
      WBsf977742
      WBsf977743
      WBsf977744
      WBsf977746
      WBsf977747
      WBsf977749
      WBsf977750
      WBsf977751
      WBsf977753
      WBsf977754
      WBsf977757
      WBsf977759
      WBsf977762
      WBsf977766
      WBsf977767
      WBsf977768
      WBsf977770
      WBsf977771
      WBsf977772
      WBsf977774
      WBsf977775
      WBsf977777
      WBsf977778
      WBsf977779
      WBsf977780
      WBsf977783
      WBsf977784
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      WBsf977786
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      WBsf977789
      WBsf977790
      WBsf977792
      WBsf977793
      WBsf977796
      WBsf977797
      WBsf977800
      WBsf977802
      WBsf977803
      WBsf977804
      WBsf977805
      WBsf977806
      WBsf977807
      WBsf977808
      WBsf977809
      WBsf977810
      WBsf977811
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      WBsf977814
      WBsf977815
      WBsf977816
      WBsf977817
      WBsf977818
      WBsf977820
      WBsf977821
      WBsf977822
      WBsf977823
      WBsf977825
      WBsf977826
      WBsf977827
      WBsf977828
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      WBsf977830
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      WBsf977835
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      WBsf977841
      WBsf977843
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      WBsf977846
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      WBsf977848
      WBsf977849
      WBsf977852
      WBsf977853
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      WBsf977857
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      WBsf977859
      WBsf977860
      WBsf977861
      WBsf977862
      WBsf977864
      WBsf977867
      WBsf977868
      WBsf977870
      WBsf977872
      WBsf977873
      WBsf977874
      WBsf977875
      WBsf977878
      WBsf977879
      WBsf977881
      WBsf977883
      WBsf977884
      WBsf977885
      WBsf977887
      WBsf977888
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      WBsf977890
      WBsf977891
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      WBsf977896
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      WBsf977899
      WBsf977900
      WBsf977902
      WBsf977903
      WBsf977904
      WBsf977905
      WBsf977906
      WBsf977907
      WBsf977910
      WBsf977911
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      WBsf977914
      WBsf977915
      WBsf977917
      WBsf977918
      WBsf977919
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      WBsf977922
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      WBsf977925
      WBsf977926
      WBsf977927
      WBsf977928
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      WBsf977930
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      WBsf977933
      WBsf977934
      WBsf977936
      WBsf977937
      WBsf977938
      WBsf977939
      WBsf977940
      WBsf977941
      WBsf977942
      WBsf977943
      WBsf977944
      WBsf977946
      WBsf977947
      WBsf977948
      WBsf977949
    Transcription_factor: WBTranscriptionFactor000610
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1183
      Expr11341
      Expr1015484
      Expr1036630
      Expr1143885
      Expr1200056
      Expr2014227
      Expr2032468
    Drives_construct: WBCnstr00010135
      WBCnstr00018784
      WBCnstr00028801
    Construct_product: WBCnstr00010135
      WBCnstr00016707
      WBCnstr00028801
    Microarray_results (24)
    Expression_cluster (134)
    Interaction: WBInteraction000031379
      WBInteraction000163405
      WBInteraction000190184
      WBInteraction000197957
      WBInteraction000214493
      WBInteraction000226033
      WBInteraction000227250
      WBInteraction000270938
      WBInteraction000289063
      WBInteraction000305942
      WBInteraction000311678
      WBInteraction000317170
      WBInteraction000328348
      WBInteraction000334384
      WBInteraction000337059
      WBInteraction000343671
      WBInteraction000344409
      WBInteraction000344815
      WBInteraction000353864
      WBInteraction000373204
      WBInteraction000423155
      WBInteraction000425242
      WBInteraction000431971
      WBInteraction000509703
      WBInteraction000509727
      WBInteraction000520737
      WBInteraction000524586
      WBInteraction000526966
      WBInteraction000527025
      WBInteraction000527451
      WBInteraction000539490
      WBInteraction000546956
      WBInteraction000547114
      WBInteraction000547115
      WBInteraction000547116
      WBInteraction000547117
  Map_info: Map: IV Position: -23.7312 Error: 0.06052
    Positive: Positive_clone: C05G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4589
        5641
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00028802
    WBPaper00044293
    WBPaper00051774
    WBPaper00061738
    WBPaper00062388
    WBPaper00064415
    WBPaper00064719
    WBPaper00065847
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene