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WormBase Tree Display for Gene: WBGene00009539

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Name Class

WBGene00009539SMapS_parentSequenceF38C2
IdentityVersion1
NameSequence_nameF38C2.7
Molecular_nameF38C2.7
F38C2.7.1
CE16006
Other_nameCELE_F38C2.7Accession_evidenceNDBBX284604
Public_nameF38C2.7
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (29)
StrainWBStrain00037597
RNASeq_FPKM (74)
GO_annotation00034583
00034584
00034585
00117188
00117189
Ortholog (53)
Paralog (20)
Structured_descriptionConcise_descriptionF38C2.7 encodes a CCCH tandem zinc finger (TZF) protein; based upon its sequence similarity to other TZF proteins, such as MEX-5 and POS-1, the product of F38C2.7 is predicted to function as an RNA-binding protein.Paper_evidenceWBPaper00029038
Curator_confirmedWBPerson1843
Date_last_updated18 Sep 2007 00:00:00
Automated_descriptionPredicted to enable mRNA 3'-UTR binding activity. Predicted to be located in cytosol. Expressed widely. Human ortholog(s) of this gene implicated in breast cancer. Is an ortholog of human ZFP36 (ZFP36 ring finger protein); ZFP36L1 (ZFP36 ring finger protein like 1); and ZFP36L2 (ZFP36 ring finger protein like 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:1612Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12862)
EFO:MONDO:0014769Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1108)
Molecular_infoCorresponding_CDSF38C2.7
Corresponding_transcriptF38C2.7.1
Associated_featureWBsf978618
Transcription_factorWBTranscriptionFactor001007
Experimental_infoRNAi_resultWBRNAi00031959Inferred_automaticallyRNAi_primary
WBRNAi00014558Inferred_automaticallyRNAi_primary
WBRNAi00046704Inferred_automaticallyRNAi_primary
Expr_patternExpr7548
Expr10315
Expr10316
Expr1034168
Expr1150585
Expr2003477
Expr2021692
Drives_constructWBCnstr00012693
WBCnstr00015250
WBCnstr00032116
Construct_productWBCnstr00016548
WBCnstr00016559
WBCnstr00032116
Microarray_resultsSMD_F38C2.7
172966_x_at
A_12_P108859
Aff_F38C2.7
GPL14144_C35D6.4_333-392_0.942_3_B
GPL14144_C35D6.4_408-467_0.952_1_A
GPL19516_CGZ0007774
GPL19516_CGZ0020503
GPL21109_C35D6.4
GPL21109_F38C2.7
GPL3518_CE16006
GPL8304_CE_WBGene00009539_A
GPL8304_CE_WBGene00009539_C
GPL8673_F38C2_7P00053
GPL8673_F38C2_7P00063
GPL8673_F38C2_7P00083
GPL9450_F38C2.7
cea2.d.24406
Expression_cluster (113)
InteractionWBInteraction000109509
WBInteraction000110098
WBInteraction000120072
WBInteraction000122076
WBInteraction000122310
WBInteraction000124409
WBInteraction000125635
WBInteraction000125983
WBInteraction000127464
WBInteraction000133857
WBInteraction000134369
WBInteraction000134516
WBInteraction000137240
WBInteraction000137612
WBInteraction000137664
WBInteraction000138891
WBInteraction000139060
WBInteraction000139302
WBInteraction000140367
WBInteraction000140579
WBInteraction000140731
WBInteraction000141280
WBInteraction000141777
WBInteraction000141985
WBInteraction000144179
WBInteraction000146204
WBInteraction000146238
WBInteraction000149149
WBInteraction000150388
WBInteraction000151542
WBInteraction000157018
WBInteraction000157088
WBInteraction000159850
WBInteraction000160118
WBInteraction000163981
WBInteraction000164537
WBInteraction000165440
WBInteraction000167971
WBInteraction000168544
WBInteraction000171087
WBInteraction000171109
WBInteraction000175567
WBInteraction000176577
WBInteraction000177590
WBInteraction000178483
WBInteraction000179125
WBInteraction000179967
WBInteraction000180295
WBInteraction000180388
WBInteraction000181532
WBInteraction000186047
WBInteraction000189486
WBInteraction000189514
WBInteraction000190531
WBInteraction000194879
WBInteraction000194996
WBInteraction000195953
WBInteraction000196686
WBInteraction000198266
WBInteraction000198291
WBInteraction000199287
WBInteraction000200346
WBInteraction000200380
WBInteraction000201361
WBInteraction000203049
WBInteraction000203405
WBInteraction000204300
WBInteraction000204335
WBInteraction000204373
WBInteraction000205577
WBInteraction000206878
WBInteraction000207089
WBInteraction000208296
WBInteraction000210079
WBInteraction000210626
WBInteraction000214053
WBInteraction000215678
WBInteraction000217561
WBInteraction000218684
WBInteraction000219439
WBInteraction000219668
WBInteraction000219725
WBInteraction000219863
WBInteraction000220722
WBInteraction000222194
WBInteraction000222403
WBInteraction000223743
WBInteraction000223831
WBInteraction000225433
WBInteraction000226901
WBInteraction000227042
WBInteraction000230772
WBInteraction000230951
WBInteraction000235370
WBInteraction000239260
WBInteraction000240309
WBInteraction000241389
WBInteraction000241491
WBInteraction000242027
WBInteraction000242357
WBInteraction000244588
WBInteraction000244885
WBInteraction000245314
WBInteraction000245654
WBInteraction000246526
WBInteraction000247406
WBInteraction000247946
WBInteraction000248415
WBInteraction000250210
WBInteraction000255834
WBInteraction000256766
WBInteraction000257138
WBInteraction000259880
WBInteraction000259884
WBInteraction000261068
WBInteraction000261177
WBInteraction000262905
WBInteraction000262975
WBInteraction000264104
WBInteraction000265677
WBInteraction000266378
WBInteraction000269589
WBInteraction000270413
WBInteraction000274026
WBInteraction000278250
WBInteraction000278964
WBInteraction000279041
WBInteraction000281167
WBInteraction000281962
WBInteraction000283926
WBInteraction000286490
WBInteraction000287386
WBInteraction000288622
WBInteraction000289562
WBInteraction000291886
WBInteraction000292447
WBInteraction000293039
WBInteraction000295423
WBInteraction000297510
WBInteraction000297630
WBInteraction000298073
WBInteraction000298259
WBInteraction000300065
WBInteraction000302613
WBInteraction000303790
WBInteraction000304389
WBInteraction000305019
WBInteraction000305675
WBInteraction000306274
WBInteraction000306649
WBInteraction000308702
WBInteraction000312291
WBInteraction000314569
WBInteraction000316792
WBInteraction000319312
WBInteraction000321552
WBInteraction000321877
WBInteraction000322287
WBInteraction000324269
WBInteraction000324433
WBInteraction000324464
WBInteraction000326776
WBInteraction000326834
WBInteraction000327228
WBInteraction000327621
WBInteraction000329072
WBInteraction000340880
WBInteraction000341269
WBInteraction000341393
WBInteraction000341967
WBInteraction000342875
WBInteraction000343524
WBInteraction000344710
WBInteraction000345623
WBInteraction000346235
WBInteraction000347410
WBInteraction000347577
WBInteraction000351452
WBInteraction000352489
WBInteraction000354200
WBInteraction000356496
WBInteraction000356962
WBInteraction000356996
WBInteraction000357057
WBInteraction000357897
WBInteraction000363081
WBInteraction000363988
WBInteraction000364285
WBInteraction000366321
WBInteraction000366955
WBInteraction000370425
WBInteraction000373022
WBInteraction000373110
WBInteraction000375650
WBInteraction000377891
WBInteraction000378165
WBInteraction000380229
WBInteraction000383555
WBInteraction000385245
WBInteraction000386598
WBInteraction000388732
WBInteraction000391113
WBInteraction000391646
WBInteraction000393335
WBInteraction000395434
WBInteraction000395450
WBInteraction000396264
WBInteraction000396782
WBInteraction000396983
WBInteraction000398193
WBInteraction000398571
WBInteraction000399228
WBInteraction000403455
WBInteraction000405119
WBInteraction000410749
WBInteraction000410863
WBInteraction000410950
WBInteraction000411709
WBInteraction000413314
WBInteraction000413368
WBInteraction000416769
WBInteraction000416945
WBInteraction000417784
WBInteraction000417953
WBInteraction000419685
WBInteraction000421927
WBInteraction000426926
WBInteraction000428335
WBInteraction000428473
WBInteraction000428932
WBInteraction000429415
WBInteraction000429930
WBInteraction000430789
WBInteraction000435880
WBInteraction000441663
WBInteraction000443289
WBInteraction000444066
WBInteraction000448097
WBInteraction000448665
WBInteraction000451982
WBInteraction000452289
WBInteraction000454221
WBInteraction000454798
WBInteraction000459062
WBInteraction000473657
WBInteraction000544165
Map_infoPositivePositive_cloneF38C2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV14.7534
MethodGene