WormBase Tree Display for Gene: WBGene00003172

WBGene00003172 SMap: S_parent: Sequence: CHROMOSOME_I
  Identity: Version: 1
    Name: CGC_name: mec-8 Person_evidence: WBPerson95
      Sequence_name: F46A9.6
      Molecular_name: F46A9.6
        F46A9.6.1
        CE08260
        F46A9.6.2
      Other_name: CELE_F46A9.6 Accession_evidence: NDB BX284601
      Public_name: mec-8
    DB_info: Database: AceView gene 1K18
        WormQTL gene WBGene00003172
        WormFlux gene WBGene00003172
        NDB locus_tag CELE_F46A9.6
        Panther gene CAEEL|WormBase=WBGene00003172|UniProtKB=G5ECJ4
          family PTHR10501
        NCBI gene 172771
        RefSeq protein NM_060107.7
        TREEFAM TREEFAM_ID TF351070
        TrEMBL UniProtAcc G5ECJ4
        UniProt_GCRP UniProtAcc G5ECJ4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:31 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (12)
  Molecular_info (5)
  Experimental_info: RNAi_result (14)
    Expr_pattern (12)
    Drives_construct: WBCnstr00002454
      WBCnstr00006517
      WBCnstr00010759
      WBCnstr00036198
      WBCnstr00041290
      WBCnstr00042667
    Construct_product: WBCnstr00006517
      WBCnstr00010759
      WBCnstr00016049
      WBCnstr00036198
      WBCnstr00041290
      WBCnstr00042667
    Regulate_expr_cluster: WBPaper00062197:mec-8_downregulated
      WBPaper00062197:mec-8_downregulated_TRN
      WBPaper00062197:mec-8_upregulated
      WBPaper00062197:mec-8_upregulated_TRN
    Antibody: WBAntibody00000576
    Microarray_results (26)
    Expression_cluster (163)
    Interaction: WBInteraction000000355
      WBInteraction000000476
      WBInteraction000000477
      WBInteraction000000478
      WBInteraction000000490
      WBInteraction000000491
      WBInteraction000000924
      WBInteraction000000947
      WBInteraction000000996
      WBInteraction000000997
      WBInteraction000000998
      WBInteraction000001386
      WBInteraction000001387
      WBInteraction000001665
      WBInteraction000001877
      WBInteraction000001878
      WBInteraction000002803
      WBInteraction000002949
      WBInteraction000002950
      WBInteraction000002951
      WBInteraction000003090
      WBInteraction000003120
      WBInteraction000003230
      WBInteraction000003266
      WBInteraction000003270
      WBInteraction000003276
      WBInteraction000003420
      WBInteraction000003559
      WBInteraction000003690
      WBInteraction000004015
      WBInteraction000004084
      WBInteraction000005125
      WBInteraction000005126
      WBInteraction000005127
      WBInteraction000005128
      WBInteraction000005129
      WBInteraction000005130
      WBInteraction000005131
      WBInteraction000005132
      WBInteraction000005299
      WBInteraction000005301
      WBInteraction000005356
      WBInteraction000005358
      WBInteraction000005755
      WBInteraction000005756
      WBInteraction000005757
      WBInteraction000008613
      WBInteraction000008614
      WBInteraction000008615
      WBInteraction000008704
      WBInteraction000008705
      WBInteraction000008706
      WBInteraction000008714
      WBInteraction000008715
      WBInteraction000008716
      WBInteraction000009911
      WBInteraction000028566
      WBInteraction000028657
      WBInteraction000028694
      WBInteraction000029506
      WBInteraction000029637
      WBInteraction000031191
      WBInteraction000031192
      WBInteraction000034565
      WBInteraction000051804
      WBInteraction000052179
      WBInteraction000052423
      WBInteraction000052796
      WBInteraction000126238
      WBInteraction000126309
      WBInteraction000126412
      WBInteraction000126697
      WBInteraction000142049
      WBInteraction000142066
      WBInteraction000142067
      WBInteraction000149167
      WBInteraction000161303
      WBInteraction000161317
      WBInteraction000161318
      WBInteraction000166056
      WBInteraction000172095
      WBInteraction000179633
      WBInteraction000185237
      WBInteraction000191513
      WBInteraction000191522
      WBInteraction000196882
      WBInteraction000202349
      WBInteraction000202356
      WBInteraction000212958
      WBInteraction000240895
      WBInteraction000254497
      WBInteraction000264592
      WBInteraction000282839
      WBInteraction000301809
      WBInteraction000306764
      WBInteraction000307153
      WBInteraction000315288
      WBInteraction000315536
      WBInteraction000319843
      WBInteraction000325638
      WBInteraction000326040
      WBInteraction000337872
      WBInteraction000352998
      WBInteraction000360805
      WBInteraction000363543
      WBInteraction000364408
      WBInteraction000367532
      WBInteraction000376223
      WBInteraction000380616
      WBInteraction000384132
      WBInteraction000384674
      WBInteraction000386492
      WBInteraction000387789
      WBInteraction000387801
      WBInteraction000387869
      WBInteraction000387872
      WBInteraction000387873
      WBInteraction000387874
      WBInteraction000387876
      WBInteraction000387956
      WBInteraction000387982
      WBInteraction000388076
      WBInteraction000388079
      WBInteraction000388236
      WBInteraction000388290
      WBInteraction000393253
      WBInteraction000399252
      WBInteraction000415217
      WBInteraction000416414
      WBInteraction000416992
      WBInteraction000424839
      WBInteraction000434348
      WBInteraction000437558
      WBInteraction000440945
      WBInteraction000446843
      WBInteraction000446955
      WBInteraction000447672
      WBInteraction000448126
      WBInteraction000450384
      WBInteraction000454538
      WBInteraction000456992
      WBInteraction000500736
      WBInteraction000500737
      WBInteraction000508718
      WBInteraction000508721
      WBInteraction000509965
      WBInteraction000509966
      WBInteraction000509973
      WBInteraction000509976
      WBInteraction000509986
      WBInteraction000509989
      WBInteraction000511569
      WBInteraction000511570
      WBInteraction000513436
      WBInteraction000514448
      WBInteraction000514455
      WBInteraction000516035
      WBInteraction000516036
      WBInteraction000516038
      WBInteraction000516041
      WBInteraction000516044
      WBInteraction000516046
      WBInteraction000518886
      WBInteraction000518968
      WBInteraction000518973
      WBInteraction000518974
      WBInteraction000518975
      WBInteraction000518976
      WBInteraction000518978
      WBInteraction000519064
      WBInteraction000519076
      WBInteraction000519077
      WBInteraction000519078
      WBInteraction000519079
      WBInteraction000519081
      WBInteraction000520807
      WBInteraction000525192
      WBInteraction000538529
      WBInteraction000538530
      WBInteraction000538531
      WBInteraction000546704
      WBInteraction000548110
      WBInteraction000548111
      WBInteraction000573473
      WBInteraction000582199
  Map_info: Map: I Position: 3.76436 Error: 0.0003
    Well_ordered
    Positive: Positive_clone: C17E4
        C34A2
        F46A9 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 27
        5741
      Multi_point (14)
      Pos_neg_data (18)
  Reference (119)
  Remark: [Lundquist EA] I'm quite certain that these polymorphisms are defects in the mec-8 gene. u456 and rh170 are small deletions of the same 2.5kb HIII fragment, u391 is a complex rearrangement that has a breakpoint in the same 2.5kb HIII fragment, and mn472 is a Tc1 insertion into the same 2.5kb HIII fragment. Furthermore, the area of these cosmids on the physical map is in good agreement with the genetic map position of mec-8. Rescue is hopefully on the way.
  Method: Gene