WormBase Tree Display for Gene: WBGene00004121

WBGene00004121 SMap: S_parent: Sequence: F35B3
  Identity: Version: 2
    Name: CGC_name: ptrn-1 Person_evidence: WBPerson105
      Sequence_name: F35B3.5
      Molecular_name (13)
      Other_name: pqn-34 Person_evidence: WBPerson625
        CELE_F35B3.5 Accession_evidence: NDB BX284606
      Public_name: ptrn-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 21 Dec 2012 09:25:09 WBPerson2970 Name_change: CGC_name: ptrn-1
                Other_name: pqn-34
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ptrn
    Allele (123)
    Possibly_affected_by: WBVar02152829
      WBVar02153052
    Strain: WBStrain00029074
      WBStrain00029075
    RNASeq_FPKM (74)
    GO_annotation (21)
    Ortholog (45)
    Structured_description: Automated_description: Enables microtubule minus-end binding activity. Involved in cytoplasmic microtubule organization and nematode larval development. Located in microtubule minus-end. Expressed in hypodermis; intestine; nervous system; and pharynx. Human ortholog(s) of this gene implicated in complex cortical dysplasia with other brain malformations. Is an ortholog of human CAMSAP1 (calmodulin regulated spectrin associated protein 1); CAMSAP2 (calmodulin regulated spectrin associated protein family member 2); and CAMSAP3 (calmodulin regulated spectrin associated protein family member 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0090131 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:19946)
  Molecular_info: Corresponding_CDS: F35B3.5a
      F35B3.5c
      F35B3.5d
      F35B3.5e
    Corresponding_CDS_history: F35B3.5a:wp137
      F35B3.5a:wp238
      F35B3.5b:wp241
    Corresponding_transcript: F35B3.5b
      F35B3.5a.1
      F35B3.5c.1
      F35B3.5d.1
      F35B3.5e.1
    Other_sequence (26)
    Associated_feature (12)
  Experimental_info: RNAi_result: WBRNAi00046282 Inferred_automatically: RNAi_primary
      WBRNAi00031747 Inferred_automatically: RNAi_primary
      WBRNAi00014292 Inferred_automatically: RNAi_primary
    Expr_pattern (17)
    Drives_construct: WBCnstr00019023
      WBCnstr00019024
      WBCnstr00019026
      WBCnstr00019960
      WBCnstr00020914
      WBCnstr00020915
      WBCnstr00020916
      WBCnstr00037939
    Construct_product (16)
    Regulate_expr_cluster: WBPaper00056039:ptrn-1(tm5597)_downregulated
      WBPaper00056039:ptrn-1(tm5597)_upregulated
    Antibody: WBAntibody00002655
    Microarray_results (27)
    Expression_cluster (121)
    Interaction: WBInteraction000240507
      WBInteraction000363684
      WBInteraction000365654
      WBInteraction000432853
      WBInteraction000435381
      WBInteraction000521273
      WBInteraction000524593
      WBInteraction000524594
      WBInteraction000534832
      WBInteraction000544722
      WBInteraction000551221
      WBInteraction000560738
      WBInteraction000578298
      WBInteraction000578299
      WBInteraction000578300
      WBInteraction000578301
      WBInteraction000578302
      WBInteraction000578303
      WBInteraction000578304
      WBInteraction000578305
      WBInteraction000578306
      WBInteraction000578307
      WBInteraction000578308
      WBInteraction000578309
      WBInteraction000578310
      WBInteraction000578311
      WBInteraction000578312
      WBInteraction000578313
      WBInteraction000578314
      WBInteraction000578315
      WBInteraction000578316
      WBInteraction000578317
      WBInteraction000578318
      WBInteraction000578319
      WBInteraction000578320
      WBInteraction000578321
      WBInteraction000578322
      WBInteraction000578323
      WBInteraction000578324
      WBInteraction000578325
      WBInteraction000578326
      WBInteraction000578327
      WBInteraction000578328
      WBInteraction000578329
      WBInteraction000578330
      WBInteraction000578331
      WBInteraction000578332
      WBInteraction000578333
      WBInteraction000578334
      WBInteraction000578335
      WBInteraction000578336
      WBInteraction000578337
      WBInteraction000578338
      WBInteraction000578339
      WBInteraction000578340
      WBInteraction000578341
      WBInteraction000578342
      WBInteraction000578343
      WBInteraction000578344
      WBInteraction000578345
      WBInteraction000578346
      WBInteraction000578347
      WBInteraction000578348
      WBInteraction000578349
      WBInteraction000578350
      WBInteraction000578351
      WBInteraction000578352
      WBInteraction000578353
      WBInteraction000578354
      WBInteraction000578355
      WBInteraction000578356
      WBInteraction000578357
      WBInteraction000578358
      WBInteraction000578359
      WBInteraction000578360
      WBInteraction000578361
      WBInteraction000578362
      WBInteraction000578363
      WBInteraction000578364
      WBInteraction000578365
      WBInteraction000578366
      WBInteraction000578855
      WBInteraction000578856
      WBInteraction000582302
      WBInteraction000583650
      WBInteraction000584032
    Anatomy_function: WBbtf0643
      WBbtf0644
      WBbtf0645
  Map_info: Map: X Position: 24.0718 Error: 0.001129
    Positive: Positive_clone: F35B3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (22)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene