WormBase Tree Display for Gene: WBGene00007226
expand all nodes | collapse all nodes | view schema
| WBGene00007226 | SMap | S_parent | Sequence | C01G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C01G6.4 | |||||||
| Molecular_name | C01G6.4 | ||||||||
| C01G6.4.1 | |||||||||
| CE00866 | |||||||||
| Other_name | CELE_C01G6.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C01G6.4 | ||||||||
| DB_info | Database | AceView | gene | 2J562 | |||||
| WormQTL | gene | WBGene00007226 | |||||||
| WormFlux | gene | WBGene00007226 | |||||||
| NDB | locus_tag | CELE_C01G6.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007226|UniProtKB=Q17573 | |||||||
| family | PTHR46359 | ||||||||
| NCBI | gene | 182077 | |||||||
| RefSeq | protein | NM_001393150.1 | |||||||
| TREEFAM | TREEFAM_ID | TF318022 | |||||||
| TrEMBL | UniProtAcc | Q17573 | |||||||
| UniProt_GCRP | UniProtAcc | Q17573 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| Strain | WBStrain00055359 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058545 | ||||||||
| 00058546 | |||||||||
| 00058547 | |||||||||
| 00058548 | |||||||||
| Contained_in_operon | CEOP2733 | ||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00022356 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00022115 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be part of ubiquitin ligase complex. Expressed in body wall musculature; intestine; neurons; and non-striated muscle. Is an ortholog of human RNF11 (ring finger protein 11). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01G6.4 | |||||||
| Corresponding_transcript | C01G6.4.1 | ||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf655338 | ||||||||
| WBsf989005 | |||||||||
| WBsf989006 | |||||||||
| WBsf223625 | |||||||||
| WBsf223626 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00084230 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039355 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076067 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063620 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094729 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028304 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009951 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4840 | ||||||||
| Expr1013606 | |||||||||
| Expr1033117 | |||||||||
| Expr1143471 | |||||||||
| Expr2000311 | |||||||||
| Expr2018535 | |||||||||
| Drives_construct | WBCnstr00012268 | ||||||||
| WBCnstr00033905 | |||||||||
| Construct_product | WBCnstr00033905 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction | WBInteraction000028875 | ||||||||
| WBInteraction000030693 | |||||||||
| WBInteraction000161498 | |||||||||
| WBInteraction000186790 | |||||||||
| WBInteraction000224827 | |||||||||
| WBInteraction000226209 | |||||||||
| WBInteraction000228058 | |||||||||
| WBInteraction000228059 | |||||||||
| WBInteraction000228060 | |||||||||
| WBInteraction000228061 | |||||||||
| WBInteraction000228062 | |||||||||
| WBInteraction000228063 | |||||||||
| WBInteraction000228064 | |||||||||
| WBInteraction000228065 | |||||||||
| WBInteraction000240554 | |||||||||
| WBInteraction000240555 | |||||||||
| WBInteraction000240556 | |||||||||
| WBInteraction000240557 | |||||||||
| WBInteraction000240558 | |||||||||
| WBInteraction000288400 | |||||||||
| WBInteraction000288401 | |||||||||
| WBInteraction000345170 | |||||||||
| WBInteraction000350436 | |||||||||
| WBInteraction000381889 | |||||||||
| WBInteraction000413438 | |||||||||
| WBInteraction000426826 | |||||||||
| WBInteraction000451609 | |||||||||
| WBInteraction000539963 | |||||||||
| Map_info | Positive | Positive_clone | C01G6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 1.0978 | |||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00030839 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
