WormBase Tree Display for Gene: WBGene00010437
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| WBGene00010437 | SMap | S_parent | Sequence | JC8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cox-11 | Person_evidence | WBPerson261 | |||||
| Sequence_name | JC8.5 | ||||||||
| Molecular_name | JC8.5a | ||||||||
| JC8.5a.1 | |||||||||
| CE38202 | |||||||||
| JC8.5b | |||||||||
| CE17988 | |||||||||
| JC8.5b.1 | |||||||||
| Other_name | CELE_JC8.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | cox-11 | ||||||||
| DB_info | Database | AceView | gene | 4O11 | |||||
| WormQTL | gene | WBGene00010437 | |||||||
| WormFlux | gene | WBGene00010437 | |||||||
| NDB | locus_tag | CELE_JC8.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010437|UniProtKB=Q95QD5 | |||||||
| family | PTHR21320 | ||||||||
| NCBI | gene | 186814 | |||||||
| RefSeq | protein | NM_070146.7 | |||||||
| NM_001306923.3 | |||||||||
| TrEMBL | UniProtAcc | S6F574 | |||||||
| Q95QD5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95QD5 | |||||||
| OMIM | gene | 603648 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 Jan 2013 14:30:54 | WBPerson2970 | Name_change | CGC_name | cox-11 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cox | ||||||||
| Allele (71) | |||||||||
| Strain | WBStrain00003460 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00088349 | ||||||||
| 00088350 | |||||||||
| 00117855 | |||||||||
| Contained_in_operon | CEOP4536 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable copper ion binding activity. Predicted to be located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in cytochrome-c oxidase deficiency disease. Is an ortholog of human COX11 (cytochrome c oxidase copper chaperone COX11). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070485 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2261) | ||||
| Molecular_info | Corresponding_CDS | JC8.5a | |||||||
| JC8.5b | |||||||||
| Corresponding_CDS_history | JC8.5:wp140 | ||||||||
| Corresponding_transcript | JC8.5a.1 | ||||||||
| JC8.5b.1 | |||||||||
| Other_sequence (42) | |||||||||
| Associated_feature | WBsf229399 | ||||||||
| WBsf229400 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112816 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00008939 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049573 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025826 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033794 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071820 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112936 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112876 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061684 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071488 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6300 | ||||||||
| Expr1011421 | |||||||||
| Expr1034553 | |||||||||
| Expr1153300 | |||||||||
| Expr2010471 | |||||||||
| Expr2028711 | |||||||||
| Drives_construct | WBCnstr00003921 | ||||||||
| WBCnstr00031417 | |||||||||
| Construct_product | WBCnstr00031417 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction | WBInteraction000105821 | ||||||||
| WBInteraction000109068 | |||||||||
| WBInteraction000123277 | |||||||||
| WBInteraction000123453 | |||||||||
| WBInteraction000144888 | |||||||||
| WBInteraction000146289 | |||||||||
| WBInteraction000151041 | |||||||||
| WBInteraction000161581 | |||||||||
| WBInteraction000172566 | |||||||||
| WBInteraction000195711 | |||||||||
| WBInteraction000245006 | |||||||||
| WBInteraction000268079 | |||||||||
| WBInteraction000278103 | |||||||||
| WBInteraction000278581 | |||||||||
| WBInteraction000283525 | |||||||||
| WBInteraction000287016 | |||||||||
| WBInteraction000287017 | |||||||||
| WBInteraction000290439 | |||||||||
| WBInteraction000301231 | |||||||||
| WBInteraction000301982 | |||||||||
| WBInteraction000394092 | |||||||||
| WBInteraction000397154 | |||||||||
| WBInteraction000404391 | |||||||||
| WBInteraction000460064 | |||||||||
| WBInteraction000467212 | |||||||||
| WBInteraction000536294 | |||||||||
| WBInteraction000536297 | |||||||||
| WBInteraction000536300 | |||||||||
| WBInteraction000579432 | |||||||||
| Map_info | Map | IV | Position | 8.48644 | |||||
| Positive | Positive_clone | JC8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
