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WormBase Tree Display for Gene: WBGene00011834

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Name Class

WBGene00011834SMapS_parentSequenceT19B10
IdentityVersion2
NameCGC_namedvc-1Paper_evidenceWBPaper00041617
Person_evidenceWBPerson1725
Sequence_nameT19B10.6
Molecular_nameT19B10.6
T19B10.6.1
CE06460
T19B10.6.2
T19B10.6.3
Other_nameCELE_T19B10.6Accession_evidenceNDBBX284605
Public_namedvc-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
212 Oct 2012 15:09:29WBPerson2970Name_changeCGC_namedvc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdvc
Allele (32)
StrainWBStrain00032099
RNASeq_FPKM (74)
GO_annotation (22)
Ortholog (37)
Structured_descriptionAutomated_descriptionPredicted to enable polyubiquitin modification-dependent protein binding activity. Involved in DNA damage response. Located in nucleus. Expressed widely. Human ortholog(s) of this gene implicated in Ruijs-Aalfs syndrome. Is an ortholog of human SPRTN (SprT-like N-terminal domain).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0111264Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:25356)
Molecular_infoCorresponding_CDST19B10.6
Corresponding_transcriptT19B10.6.1
T19B10.6.2
T19B10.6.3
Other_sequence (20)
Associated_featureWBsf653090
WBsf977284
WBsf977285
WBsf1001309
WBsf234520
Experimental_infoRNAi_resultWBRNAi00111593Inferred_automaticallyRNAi_primary
WBRNAi00053495Inferred_automaticallyRNAi_primary
WBRNAi00077925Inferred_automaticallyRNAi_primary
WBRNAi00035649Inferred_automaticallyRNAi_primary
WBRNAi00007671Inferred_automaticallyRNAi_primary
WBRNAi00018820Inferred_automaticallyRNAi_primary
WBRNAi00000380Inferred_automaticallyRNAi_primary
WBRNAi00085708Inferred_automaticallyRNAi_primary
Expr_patternExpr10587
Expr1010710
Expr1035216
Expr1157061
Expr2011121
Expr2029357
Drives_constructWBCnstr00030348
Construct_productWBCnstr00017016
WBCnstr00030348
Microarray_results (23)
Expression_cluster (156)
InteractionWBInteraction000103841
WBInteraction000104245
WBInteraction000104416
WBInteraction000105167
WBInteraction000106471
WBInteraction000107361
WBInteraction000108856
WBInteraction000111254
WBInteraction000112483
WBInteraction000112578
WBInteraction000112904
WBInteraction000114861
WBInteraction000115355
WBInteraction000116110
WBInteraction000116366
WBInteraction000120028
WBInteraction000120160
WBInteraction000121896
WBInteraction000122138
WBInteraction000122476
WBInteraction000122500
WBInteraction000123940
WBInteraction000126755
WBInteraction000127477
WBInteraction000134287
WBInteraction000134932
WBInteraction000135713
WBInteraction000135895
WBInteraction000136051
WBInteraction000136075
WBInteraction000136401
WBInteraction000136643
WBInteraction000136696
WBInteraction000138176
WBInteraction000138564
WBInteraction000141910
WBInteraction000142401
WBInteraction000142879
WBInteraction000146035
WBInteraction000146879
WBInteraction000147789
WBInteraction000151020
WBInteraction000151577
WBInteraction000151753
WBInteraction000151895
WBInteraction000152164
WBInteraction000156697
WBInteraction000156856
WBInteraction000160295
WBInteraction000160453
WBInteraction000160551
WBInteraction000160727
WBInteraction000160973
WBInteraction000161240
WBInteraction000163402
WBInteraction000163730
WBInteraction000164531
WBInteraction000164629
WBInteraction000164940
WBInteraction000170291
WBInteraction000170627
WBInteraction000170889
WBInteraction000171137
WBInteraction000171396
WBInteraction000174617
WBInteraction000174683
WBInteraction000175646
WBInteraction000175699
WBInteraction000176414
WBInteraction000177816
WBInteraction000178081
WBInteraction000179134
WBInteraction000179175
WBInteraction000181079
WBInteraction000181552
WBInteraction000181677
WBInteraction000182366
WBInteraction000183852
WBInteraction000185550
WBInteraction000186898
WBInteraction000187738
WBInteraction000188782
WBInteraction000189472
WBInteraction000189769
WBInteraction000189845
WBInteraction000189935
WBInteraction000190397
WBInteraction000190710
WBInteraction000195145
WBInteraction000195293
WBInteraction000195660
WBInteraction000196532
WBInteraction000196927
WBInteraction000198122
WBInteraction000198231
WBInteraction000199250
WBInteraction000200292
WBInteraction000202006
WBInteraction000202703
WBInteraction000203879
WBInteraction000205005
WBInteraction000206353
WBInteraction000207032
WBInteraction000207226
WBInteraction000207534
WBInteraction000207677
WBInteraction000207992
WBInteraction000208295
WBInteraction000208397
WBInteraction000209014
WBInteraction000209234
WBInteraction000210893
WBInteraction000211290
WBInteraction000214363
WBInteraction000214562
WBInteraction000215417
WBInteraction000216129
WBInteraction000216206
WBInteraction000216636
WBInteraction000217137
WBInteraction000218375
WBInteraction000219613
WBInteraction000220611
WBInteraction000224309
WBInteraction000224604
WBInteraction000225991
WBInteraction000227437
WBInteraction000228133
WBInteraction000228160
WBInteraction000229025
WBInteraction000229092
WBInteraction000229234
WBInteraction000229736
WBInteraction000230962
WBInteraction000231673
WBInteraction000231838
WBInteraction000232189
WBInteraction000232247
WBInteraction000235674
WBInteraction000239864
WBInteraction000241331
WBInteraction000242317
WBInteraction000242353
WBInteraction000243006
WBInteraction000243202
WBInteraction000244135
WBInteraction000244678
WBInteraction000246140
WBInteraction000249003
WBInteraction000249868
WBInteraction000249944
WBInteraction000251016
WBInteraction000251737
WBInteraction000253968
WBInteraction000255003
WBInteraction000255201
WBInteraction000256139
WBInteraction000256340
WBInteraction000256587
WBInteraction000257428
WBInteraction000258203
WBInteraction000259962
WBInteraction000259968
WBInteraction000260027
WBInteraction000263577
WBInteraction000266285
WBInteraction000266859
WBInteraction000267477
WBInteraction000268262
WBInteraction000268456
WBInteraction000269809
WBInteraction000270146
WBInteraction000272501
WBInteraction000273862
WBInteraction000277416
WBInteraction000278130
WBInteraction000278261
WBInteraction000278456
WBInteraction000279018
WBInteraction000279931
WBInteraction000280060
WBInteraction000281147
WBInteraction000282044
WBInteraction000282494
WBInteraction000285706
WBInteraction000287904
WBInteraction000288928
WBInteraction000289332
WBInteraction000291067
WBInteraction000292330
WBInteraction000295008
WBInteraction000296505
WBInteraction000297304
WBInteraction000299452
WBInteraction000301271
WBInteraction000303152
WBInteraction000303912
WBInteraction000304637
WBInteraction000305044
WBInteraction000305080
WBInteraction000306464
WBInteraction000307053
WBInteraction000307194
WBInteraction000307961
WBInteraction000308552
WBInteraction000309854
WBInteraction000310111
WBInteraction000310973
WBInteraction000311647
WBInteraction000312820
WBInteraction000313130
WBInteraction000314655
WBInteraction000315073
WBInteraction000315560
WBInteraction000316511
WBInteraction000316804
WBInteraction000317017
WBInteraction000317310
WBInteraction000320619
WBInteraction000322061
WBInteraction000323164
WBInteraction000323217
WBInteraction000323256
WBInteraction000325555
WBInteraction000326700
WBInteraction000327200
WBInteraction000327488
WBInteraction000330971
WBInteraction000331349
WBInteraction000331967
WBInteraction000338269
WBInteraction000339970
WBInteraction000341507
WBInteraction000341851
WBInteraction000342191
WBInteraction000343655
WBInteraction000348640
WBInteraction000350461
WBInteraction000351776
WBInteraction000353875
WBInteraction000354001
WBInteraction000354403
WBInteraction000354764
WBInteraction000355872
WBInteraction000357632
WBInteraction000358205
WBInteraction000358869
WBInteraction000358946
WBInteraction000360317
WBInteraction000362173
WBInteraction000362596
WBInteraction000364038
WBInteraction000364147
WBInteraction000365913
WBInteraction000367423
WBInteraction000368620
WBInteraction000369181
WBInteraction000369675
WBInteraction000369749
WBInteraction000370240
WBInteraction000371605
WBInteraction000371906
WBInteraction000372532
WBInteraction000373734
WBInteraction000373752
WBInteraction000374012
WBInteraction000379903
WBInteraction000380669
WBInteraction000382154
WBInteraction000390763
WBInteraction000391467
WBInteraction000392275
WBInteraction000392524
WBInteraction000392936
WBInteraction000393255
WBInteraction000393454
WBInteraction000393858
WBInteraction000397678
WBInteraction000399509
WBInteraction000401889
WBInteraction000403946
WBInteraction000404734
WBInteraction000406018
WBInteraction000406870
WBInteraction000410911
WBInteraction000411477
WBInteraction000412541
WBInteraction000413613
WBInteraction000415038
WBInteraction000415796
WBInteraction000416356
WBInteraction000417687
WBInteraction000417746
WBInteraction000421922
WBInteraction000422108
WBInteraction000422953
WBInteraction000423444
WBInteraction000424329
WBInteraction000436271
WBInteraction000438599
WBInteraction000438652
WBInteraction000438690
WBInteraction000443275
WBInteraction000445518
WBInteraction000446068
WBInteraction000446483
WBInteraction000449943
WBInteraction000450579
WBInteraction000451354
WBInteraction000452584
WBInteraction000454259
WBInteraction000456606
WBInteraction000457770
WBInteraction000458117
WBInteraction000461165
WBInteraction000461473
WBInteraction000547122
WBInteraction000582762
Map_infoMapVPosition2.98922
PositivePositive_cloneT19B10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00041617
WBPaper00055090
WBPaper00057917
WBPaper00058968
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene