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WormBase Tree Display for Gene: WBGene00011867

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Name Class

WBGene00011867SMapS_parentSequenceT20G5
IdentityVersion3
NameCGC_namechc-1Person_evidenceWBPerson217
Sequence_nameT20G5.1
Molecular_nameT20G5.1
T20G5.1.1
CE00480
Other_nameclhc-1Paper_evidenceWBPaper00031805
CELE_T20G5.1Accession_evidenceNDBBX284603
Public_namechc-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
204 Nov 2004 16:11:20WBPerson2970Name_changeCGC_namechc-1
330 Apr 2008 14:28:36WBPerson2970Name_changeOther_nameclhc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchc
Allele (82)
Possibly_affected_byWBVar02153072
WBVar00000423
StrainWBStrain00037310
WBStrain00005825
RNASeq_FPKM (74)
GO_annotation (34)
Contained_in_operonCEOP3858
Ortholog (47)
Structured_descriptionConcise_descriptionchc-1 encodes the C. elegans clathrin heavy chain ortholog; loss of chc-1 activity via RNAi results in defects in receptor-mediated yolk endocytosis and thus, embryonic lethality.Paper_evidenceWBPaper00003831
Curator_confirmedWBPerson1843
Date_last_updated21 Mar 2008 00:00:00
Automated_descriptionPredicted to enable clathrin light chain binding activity. Involved in several processes, including apical protein localization; determination of adult lifespan; and positive regulation of clathrin-dependent endocytosis. Located in cell periphery; clathrin-coated endocytic vesicle; and mitotic spindle. Expressed in coelomocyte; germ line; hyp7 syncytium; hypodermal cell; and pharyngeal cell. Human ortholog(s) of this gene implicated in autosomal dominant intellectual developmental disorder 56. Is an ortholog of human CLTC (clathrin heavy chain) and CLTCL1 (clathrin heavy chain like 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0080226Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2092)
Molecular_infoCorresponding_CDST20G5.1
Corresponding_transcriptT20G5.1.1
Other_sequence (98)
Associated_featureWBsf659485
WBsf659486
WBsf993933
WBsf993934
WBsf1015749
WBsf225683
Experimental_infoRNAi_result (68)
Expr_pattern (13)
Drives_constructWBCnstr00000149
WBCnstr00017705
WBCnstr00030323
Construct_product (16)
AntibodyWBAntibody00000734
WBAntibody00001390
Microarray_results (19)
Expression_cluster (145)
InteractionWBInteraction000009209
WBInteraction000009542
WBInteraction000028512
WBInteraction000028944
WBInteraction000029673
WBInteraction000031860
WBInteraction000033077
WBInteraction000033247
WBInteraction000033967
WBInteraction000034241
WBInteraction000034292
WBInteraction000034609
WBInteraction000035620
WBInteraction000038219
WBInteraction000043813
WBInteraction000044209
WBInteraction000045332
WBInteraction000045781
WBInteraction000047014
WBInteraction000047284
WBInteraction000047971
WBInteraction000050629
WBInteraction000105739
WBInteraction000116395
WBInteraction000122228
WBInteraction000134166
WBInteraction000137848
WBInteraction000138882
WBInteraction000139546
WBInteraction000148701
WBInteraction000152396
WBInteraction000153003
WBInteraction000153116
WBInteraction000153117
WBInteraction000159258
WBInteraction000162572
WBInteraction000162573
WBInteraction000162574
WBInteraction000164213
WBInteraction000164249
WBInteraction000166995
WBInteraction000167752
WBInteraction000167766
WBInteraction000167849
WBInteraction000169519
WBInteraction000169531
WBInteraction000174320
WBInteraction000174484
WBInteraction000184453
WBInteraction000185493
WBInteraction000185739
WBInteraction000185770
WBInteraction000186715
WBInteraction000188154
WBInteraction000190631
WBInteraction000190781
WBInteraction000198247
WBInteraction000201070
WBInteraction000201123
WBInteraction000206664
WBInteraction000207086
WBInteraction000208450
WBInteraction000209311
WBInteraction000213931
WBInteraction000216005
WBInteraction000217016
WBInteraction000224890
WBInteraction000225220
WBInteraction000228961
WBInteraction000232586
WBInteraction000233141
WBInteraction000236194
WBInteraction000238025
WBInteraction000238716
WBInteraction000244868
WBInteraction000245084
WBInteraction000246411
WBInteraction000247723
WBInteraction000247979
WBInteraction000249214
WBInteraction000250522
WBInteraction000255171
WBInteraction000260177
WBInteraction000262600
WBInteraction000262884
WBInteraction000264732
WBInteraction000268149
WBInteraction000268414
WBInteraction000271708
WBInteraction000274987
WBInteraction000281702
WBInteraction000283934
WBInteraction000285248
WBInteraction000288188
WBInteraction000288720
WBInteraction000294544
WBInteraction000300351
WBInteraction000300733
WBInteraction000301669
WBInteraction000303009
WBInteraction000307328
WBInteraction000307340
WBInteraction000307873
WBInteraction000310280
WBInteraction000314164
WBInteraction000316498
WBInteraction000317224
WBInteraction000319100
WBInteraction000325010
WBInteraction000328090
WBInteraction000329236
WBInteraction000334551
WBInteraction000335252
WBInteraction000335852
WBInteraction000339108
WBInteraction000339871
WBInteraction000344318
WBInteraction000345394
WBInteraction000346390
WBInteraction000346635
WBInteraction000348672
WBInteraction000351312
WBInteraction000351912
WBInteraction000352987
WBInteraction000358017
WBInteraction000361024
WBInteraction000361792
WBInteraction000362997
WBInteraction000365205
WBInteraction000365231
WBInteraction000367926
WBInteraction000370954
WBInteraction000373172
WBInteraction000376871
WBInteraction000377514
WBInteraction000378521
WBInteraction000383453
WBInteraction000383987
WBInteraction000384003
WBInteraction000384551
WBInteraction000385018
WBInteraction000389898
WBInteraction000390767
WBInteraction000397058
WBInteraction000397082
WBInteraction000397196
WBInteraction000397217
WBInteraction000397459
WBInteraction000398517
WBInteraction000400203
WBInteraction000403217
WBInteraction000408981
WBInteraction000409554
WBInteraction000414930
WBInteraction000415841
WBInteraction000416206
WBInteraction000416489
WBInteraction000426358
WBInteraction000426543
WBInteraction000430563
WBInteraction000434035
WBInteraction000434963
WBInteraction000439427
WBInteraction000442316
WBInteraction000445349
WBInteraction000451672
WBInteraction000453780
WBInteraction000455321
WBInteraction000455627
WBInteraction000456567
WBInteraction000457929
WBInteraction000461638
WBInteraction000463834
WBInteraction000463835
WBInteraction000465874
WBInteraction000466238
WBInteraction000472168
WBInteraction000473867
WBInteraction000475298
WBInteraction000500604
WBInteraction000502834
WBInteraction000502979
WBInteraction000504672
WBInteraction000505172
WBInteraction000512996
WBInteraction000514408
WBInteraction000515439
WBInteraction000515590
WBInteraction000517834
WBInteraction000519890
WBInteraction000520348
WBInteraction000520364
WBInteraction000522857
WBInteraction000522861
WBInteraction000522982
WBInteraction000523106
WBInteraction000523287
WBInteraction000523443
WBInteraction000523461
WBInteraction000523474
WBInteraction000523780
WBInteraction000523788
WBInteraction000523798
WBInteraction000525297
WBInteraction000525300
WBInteraction000532920
WBInteraction000535533
WBInteraction000539079
WBInteraction000541739
WBInteraction000542526
WBInteraction000542958
WBInteraction000543638
WBInteraction000543693
WBInteraction000543702
WBInteraction000543927
WBInteraction000544359
WBInteraction000545998
WBInteraction000549794
WBInteraction000552921
WBInteraction000554947
WBInteraction000554951
WBInteraction000554958
WBInteraction000556555
WBInteraction000556721
WBInteraction000556886
WBInteraction000560928
WBInteraction000562308
WBInteraction000563280
WBInteraction000563718
WBInteraction000564674
WBInteraction000565372
WBInteraction000566252
WBInteraction000566531
WBInteraction000567195
WBInteraction000567402
WBInteraction000569440
WBInteraction000570275
WBInteraction000571932
WBInteraction000572787
WBInteraction000573730
WBInteraction000577950
WBInteraction000580781
WBInteraction000584451
Map_infoMapIIIPosition2.01234Error0.001699
PositivePositive_cloneT20G5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (42)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene