WormBase Tree Display for Gene: WBGene00012140

WBGene00012140 SMap: S_parent: Sequence: T28F4
  Identity: Version: 1
    Name: Sequence_name: T28F4.5
      Molecular_name: T28F4.5
        T28F4.5.1
        CE06527
        T28F4.5.2
      Other_name: CELE_T28F4.5 Accession_evidence: NDB BX284601
      Public_name: T28F4.5
    DB_info: Database: AceView gene 1I69
        WormQTL gene WBGene00012140
        WormFlux gene WBGene00012140
        NDB locus_tag CELE_T28F4.5
        Panther gene CAEEL|WormBase=WBGene00012140|UniProtKB=Q22850
          family PTHR13177
        NCBI gene 172503
        RefSeq protein NM_059701.8
        TREEFAM TREEFAM_ID TF318830
        TrEMBL UniProtAcc Q22850
        UniProt_GCRP UniProtAcc Q22850
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (21)
    RNASeq_FPKM (74)
    GO_annotation: 00076609
      00076610
      00076611
      00076612
    Ortholog (24)
    Paralog: WBGene00010019 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Concise_description: The T28F4.5 gene encodes a homolog of Death Associated Protein 1 (DAP-1) protein that may be involved in apoptosis. Paper_evidence: WBPaper00004589
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable death domain binding activity. Predicted to be involved in apoptotic signaling pathway; cellular response to amino acid starvation; and negative regulation of autophagy. Is an ortholog of human DAP (death associated protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T28F4.5
    Corresponding_transcript: T28F4.5.1
      T28F4.5.2
    Other_sequence: CBC04110_1
      CRC00035_1
      Tcir_isotig27074
      CR01683
      CJC01013_1
    Associated_feature: WBsf643454
      WBsf643455
      WBsf981044
      WBsf218010
      WBsf218011
  Experimental_info: RNAi_result: WBRNAi00054444 Inferred_automatically: RNAi_primary
      WBRNAi00036105 Inferred_automatically: RNAi_primary
      WBRNAi00004348 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025397
      Expr1035369
      Expr1157988
      Expr2006634
      Expr2024851
    Drives_construct: WBCnstr00030111
    Construct_product: WBCnstr00030111
    Microarray_results (25)
    Expression_cluster (300)
    Interaction: WBInteraction000101710
      WBInteraction000113711
      WBInteraction000120159
      WBInteraction000120231
      WBInteraction000120343
      WBInteraction000143577
      WBInteraction000160053
      WBInteraction000170146
      WBInteraction000178056
      WBInteraction000178294
      WBInteraction000178618
      WBInteraction000179889
      WBInteraction000180677
      WBInteraction000182158
      WBInteraction000187822
      WBInteraction000198909
      WBInteraction000198921
      WBInteraction000203125
      WBInteraction000204216
      WBInteraction000204514
      WBInteraction000207072
      WBInteraction000208275
      WBInteraction000208784
      WBInteraction000209397
      WBInteraction000213430
      WBInteraction000215549
      WBInteraction000216586
      WBInteraction000216832
      WBInteraction000217351
      WBInteraction000220057
      WBInteraction000220382
      WBInteraction000221247
      WBInteraction000223760
      WBInteraction000224532
      WBInteraction000229243
      WBInteraction000230711
      WBInteraction000232889
      WBInteraction000234577
      WBInteraction000234838
      WBInteraction000235099
      WBInteraction000235569
      WBInteraction000235575
      WBInteraction000239076
      WBInteraction000245207
      WBInteraction000249010
      WBInteraction000249340
      WBInteraction000249597
      WBInteraction000253908
      WBInteraction000257649
      WBInteraction000257974
      WBInteraction000259629
      WBInteraction000262367
      WBInteraction000263620
      WBInteraction000268627
      WBInteraction000269407
      WBInteraction000277906
      WBInteraction000279868
      WBInteraction000280419
      WBInteraction000282489
      WBInteraction000284940
      WBInteraction000289476
      WBInteraction000291623
      WBInteraction000292318
      WBInteraction000293381
      WBInteraction000293903
      WBInteraction000295881
      WBInteraction000302528
      WBInteraction000309245
      WBInteraction000310535
      WBInteraction000315300
      WBInteraction000319115
      WBInteraction000322688
      WBInteraction000326932
      WBInteraction000328746
      WBInteraction000331932
      WBInteraction000332034
      WBInteraction000334577
      WBInteraction000335793
      WBInteraction000342965
      WBInteraction000343586
      WBInteraction000348766
      WBInteraction000349343
      WBInteraction000350093
      WBInteraction000354146
      WBInteraction000356819
      WBInteraction000357758
      WBInteraction000358977
      WBInteraction000365743
      WBInteraction000366934
      WBInteraction000368025
      WBInteraction000370014
      WBInteraction000370548
      WBInteraction000371571
      WBInteraction000374676
      WBInteraction000377719
      WBInteraction000378077
      WBInteraction000381526
      WBInteraction000381790
      WBInteraction000383063
      WBInteraction000383153
      WBInteraction000383186
      WBInteraction000383756
      WBInteraction000386744
      WBInteraction000389269
      WBInteraction000395948
      WBInteraction000397632
      WBInteraction000399051
      WBInteraction000399085
      WBInteraction000400508
      WBInteraction000404732
      WBInteraction000406048
      WBInteraction000410762
      WBInteraction000412635
      WBInteraction000412868
      WBInteraction000414052
      WBInteraction000414185
      WBInteraction000414383
      WBInteraction000414801
      WBInteraction000416003
      WBInteraction000420821
      WBInteraction000426206
      WBInteraction000426572
      WBInteraction000429323
      WBInteraction000429769
      WBInteraction000430893
      WBInteraction000433697
      WBInteraction000434111
      WBInteraction000435448
      WBInteraction000440819
      WBInteraction000446597
      WBInteraction000446788
      WBInteraction000447775
      WBInteraction000447921
      WBInteraction000448972
      WBInteraction000449615
      WBInteraction000451240
      WBInteraction000451891
      WBInteraction000454390
      WBInteraction000458592
      WBInteraction000459810
      WBInteraction000460314
      WBInteraction000460394
      WBInteraction000580799
  Map_info: Positive: Positive_clone: T28F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 2.09689
  Reference: WBPaper00033099
  Method: Gene