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WormBase Tree Display for Gene: WBGene00020040

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Name Class

WBGene00020040SMapS_parentSequenceR12E2
IdentityVersion1
NameSequence_nameR12E2.15
Molecular_nameR12E2.15
R12E2.15.1
CE18147
R12E2.15.2
Other_nameCELE_R12E2.15Accession_evidenceNDBBX284601
Public_nameR12E2.15
DB_infoDatabaseAceViewgene1E716
WormQTLgeneWBGene00020040
WormFluxgeneWBGene00020040
NDBlocus_tagCELE_R12E2.15
NCBIgene172000
RefSeqproteinNM_001392100.1
TrEMBLUniProtAccO61781
UniProt_GCRPUniProtAccO61781
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (14)
RNASeq_FPKM (74)
OrthologWBGene00033064Caenorhabditis briggsaeFrom_analysisOMA
WBGene00033066Caenorhabditis briggsaeFrom_analysisOMA
WBGene00033065Caenorhabditis briggsaeFrom_analysisOMA
WBGene00062342Caenorhabditis remaneiFrom_analysisOMA
WBGene00083072Caenorhabditis remaneiFrom_analysisOMA
WBGene00142181Caenorhabditis brenneriFrom_analysisOMA
WBGene00062340Caenorhabditis remaneiFrom_analysisOMA
chrI_pilon.g647Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including carbon dioxide sensory neurons; cholinergic neurons; germline precursor cell; pharyngeal muscle cell; and tail hypodermis based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by thirty-three chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR12E2.15
Corresponding_transcriptR12E2.15.1
R12E2.15.2
Associated_featureWBsf649079
WBsf983346
WBsf1009627
WBsf219245
Experimental_infoRNAi_resultWBRNAi00051852Inferred_automaticallyRNAi_primary
WBRNAi00004085Inferred_automaticallyRNAi_primary
WBRNAi00034891Inferred_automaticallyRNAi_primary
Expr_patternExpr1022519
Expr1038710
Expr1155511
Expr2005617
Expr2023834
Drives_constructWBCnstr00025409
Construct_productWBCnstr00025409
Microarray_results (19)
Expression_cluster (291)
InteractionWBInteraction000104850
WBInteraction000107161
WBInteraction000109220
WBInteraction000109988
WBInteraction000111136
WBInteraction000112205
WBInteraction000112586
WBInteraction000112973
WBInteraction000113668
WBInteraction000114467
WBInteraction000114863
WBInteraction000117597
WBInteraction000118469
WBInteraction000120266
WBInteraction000120428
WBInteraction000121820
WBInteraction000122251
WBInteraction000122352
WBInteraction000124939
WBInteraction000133942
WBInteraction000134381
WBInteraction000136674
WBInteraction000139223
WBInteraction000141710
WBInteraction000142503
WBInteraction000142867
WBInteraction000143400
WBInteraction000144056
WBInteraction000147589
WBInteraction000149304
WBInteraction000149602
WBInteraction000150687
WBInteraction000150782
WBInteraction000151937
WBInteraction000151956
WBInteraction000152257
WBInteraction000152658
WBInteraction000159688
WBInteraction000161454
WBInteraction000163749
WBInteraction000165066
WBInteraction000175187
WBInteraction000183787
WBInteraction000186095
WBInteraction000186385
WBInteraction000186398
WBInteraction000188174
WBInteraction000188302
WBInteraction000190171
WBInteraction000190956
WBInteraction000192286
WBInteraction000197322
WBInteraction000197331
WBInteraction000199224
WBInteraction000205278
WBInteraction000205967
WBInteraction000208861
WBInteraction000211662
WBInteraction000214385
WBInteraction000215615
WBInteraction000216826
WBInteraction000217084
WBInteraction000219016
WBInteraction000220201
WBInteraction000220224
WBInteraction000230141
WBInteraction000232346
WBInteraction000232389
WBInteraction000232958
WBInteraction000233735
WBInteraction000234883
WBInteraction000235673
WBInteraction000238195
WBInteraction000239674
WBInteraction000240940
WBInteraction000243110
WBInteraction000245195
WBInteraction000250477
WBInteraction000252039
WBInteraction000252177
WBInteraction000257847
WBInteraction000259630
WBInteraction000261559
WBInteraction000265786
WBInteraction000269111
WBInteraction000271310
WBInteraction000272590
WBInteraction000272977
WBInteraction000274571
WBInteraction000276418
WBInteraction000278320
WBInteraction000279408
WBInteraction000282730
WBInteraction000287607
WBInteraction000290010
WBInteraction000290077
WBInteraction000290855
WBInteraction000292637
WBInteraction000302978
WBInteraction000304027
WBInteraction000306593
WBInteraction000307793
WBInteraction000309878
WBInteraction000310037
WBInteraction000310776
WBInteraction000311676
WBInteraction000312077
WBInteraction000313206
WBInteraction000313912
WBInteraction000313943
WBInteraction000314019
WBInteraction000316431
WBInteraction000318241
WBInteraction000319340
WBInteraction000332433
WBInteraction000333593
WBInteraction000334689
WBInteraction000343926
WBInteraction000344230
WBInteraction000345232
WBInteraction000346956
WBInteraction000347284
WBInteraction000353570
WBInteraction000353768
WBInteraction000356804
WBInteraction000361578
WBInteraction000368860
WBInteraction000372287
WBInteraction000375632
WBInteraction000378572
WBInteraction000379535
WBInteraction000388900
WBInteraction000391796
WBInteraction000399160
WBInteraction000400533
WBInteraction000408482
WBInteraction000409783
WBInteraction000417874
WBInteraction000418175
WBInteraction000418525
WBInteraction000418783
WBInteraction000425926
WBInteraction000437316
WBInteraction000441315
WBInteraction000444409
WBInteraction000444622
WBInteraction000446932
WBInteraction000451992
WBInteraction000455002
Map_infoPositivePositive_cloneR12E2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI-1.69657
ReferenceWBPaper00064623
MethodGene