WormBase Tree Display for Gene: WBGene00009632
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| WBGene00009632 | SMap | S_parent | Sequence | F42E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttyh-1 | |||||||
| Sequence_name | F42E11.2 | ||||||||
| Molecular_name | F42E11.2a | ||||||||
| F42E11.2a.1 | |||||||||
| CE03309 | |||||||||
| F42E11.2b | |||||||||
| CE23715 | |||||||||
| F42E11.2c | |||||||||
| CE31512 | |||||||||
| F42E11.2b.1 | |||||||||
| F42E11.2c.1 | |||||||||
| Other_name | CELE_F42E11.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ttyh-1 | ||||||||
| DB_info | Database | AceView | gene | XL991 | |||||
| WormQTL | gene | WBGene00009632 | |||||||
| WormFlux | gene | WBGene00009632 | |||||||
| NDB | locus_tag | CELE_F42E11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009632|UniProtKB=Q20332 | |||||||
| family | PTHR12424 | ||||||||
| NCBI | gene | 181328 | |||||||
| RefSeq | protein | NM_001392843.1 | |||||||
| NM_077502.8 | |||||||||
| NM_171973.9 | |||||||||
| SwissProt | UniProtAcc | Q20332 | |||||||
| TREEFAM | TREEFAM_ID | TF319025 | |||||||
| UniProt_GCRP | UniProtAcc | Q20332 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jun 2008 11:48:40 | WBPerson2970 | Name_change | CGC_name | ttyh-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttyh | ||||||||
| Allele (74) | |||||||||
| Strain | WBStrain00006139 | ||||||||
| WBStrain00002516 | |||||||||
| WBStrain00002623 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (43) | |||||||||
| Structured_description | Automated_description | Predicted to enable intracellular calcium activated chloride channel activity and volume-sensitive chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of chloride channel complex. Is an ortholog of human TTYH3 (tweety family member 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42E11.2a | |||||||
| F42E11.2b | |||||||||
| F42E11.2c | |||||||||
| Corresponding_transcript | F42E11.2a.1 | ||||||||
| F42E11.2b.1 | |||||||||
| F42E11.2c.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047096 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047097 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014822 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032139 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1376 | ||||||||
| Expr6043 | |||||||||
| Expr6044 | |||||||||
| Expr6045 | |||||||||
| Expr1015511 | |||||||||
| Expr1034207 | |||||||||
| Expr1150961 | |||||||||
| Expr2017631 | |||||||||
| Expr2035771 | |||||||||
| Drives_construct | WBCnstr00001931 | ||||||||
| WBCnstr00003096 | |||||||||
| WBCnstr00004540 | |||||||||
| WBCnstr00032040 | |||||||||
| Construct_product | WBCnstr00032040 | ||||||||
| Microarray_results | SMD_F42E11.2 | ||||||||
| 185122_s_at | |||||||||
| 185294_s_at | |||||||||
| A_12_P112464 | |||||||||
| A_12_P118537 | |||||||||
| A_12_P118748 | |||||||||
| Aff_F42E11.2 | |||||||||
| GPL13394_WBGene00009632 | |||||||||
| GPL13914_F42E11.2 | |||||||||
| GPL14144_F42E11.2a_1353-1412_0.897_13_C | |||||||||
| GPL14144_F42E11.2a_1524-1583_0.931_1_A | |||||||||
| GPL14144_F42E11.2a_984-1043_0.923_5_B | |||||||||
| GPL19516_CGZ0021252 | |||||||||
| GPL19516_CGZ0021253 | |||||||||
| GPL19516_CGZ0021254 | |||||||||
| GPL21109_F42E11.2a | |||||||||
| GPL21109_F42E11.2b | |||||||||
| GPL3518_CE23715 | |||||||||
| GPL3518_CE31512 | |||||||||
| GPL8304_CE_WBGene00009632_A | |||||||||
| GPL8304_CE_WBGene00009632_B | |||||||||
| GPL8673_F42E11_2aP01430 | |||||||||
| GPL8673_F42E11_2aP01441 | |||||||||
| GPL8673_F42E11_2aP01454 | |||||||||
| GPL8673_F42E11_2bP00098 | |||||||||
| GPL8673_F42E11_2bP00263 | |||||||||
| GPL8673_F42E11_2bP00274 | |||||||||
| GPL8673_F42E11_2cP00100 | |||||||||
| GPL8673_F42E11_2cP00867 | |||||||||
| GPL8673_F42E11_2cP01375 | |||||||||
| GPL9450_F42E11.2a | |||||||||
| GPL9450_F42E11.2b | |||||||||
| GPL9450_F42E11.2c | |||||||||
| cea2.c.44917 | |||||||||
| cea2.c.44920 | |||||||||
| cea2.d.25285 | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction | WBInteraction000032131 | ||||||||
| Map_info | Map | X | Position | 3.38794 | Error | 0.051494 | |||
| Positive | Positive_clone | F42E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
