WormBase Tree Display for Gene: WBGene00014030
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| WBGene00014030 | SMap | S_parent | Sequence | ZK637 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | glb-1 | Person_evidence | WBPerson69 | |||||
| Sequence_name | ZK637.13 | ||||||||
| Molecular_name | ZK637.13 | ||||||||
| ZK637.13.1 | |||||||||
| CE36418 | |||||||||
| Other_name | CELE_ZK637.13 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | glb-1 | ||||||||
| DB_info | Database | AceView | gene | 3K12 | |||||
| WormQTL | gene | WBGene00014030 | |||||||
| WormFlux | gene | WBGene00014030 | |||||||
| NDB | locus_tag | CELE_ZK637.13 | |||||||
| NCBI | gene | 176261 | |||||||
| RefSeq | protein | NM_066573.8 | |||||||
| SwissProt | UniProtAcc | P30627 | |||||||
| TREEFAM | TREEFAM_ID | TF319291 | |||||||
| UniProt_GCRP | UniProtAcc | P30627 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 May 2007 16:58:23 | WBPerson2970 | Name_change | CGC_name | glb-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glb | ||||||||
| Allele (14) | |||||||||
| Strain | WBStrain00028895 | ||||||||
| WBStrain00032765 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00040696 | ||||||||
| 00040697 | |||||||||
| 00040698 | |||||||||
| 00040699 | |||||||||
| 00040700 | |||||||||
| 00120771 | |||||||||
| 00120772 | |||||||||
| 00120773 | |||||||||
| 00120774 | |||||||||
| Ortholog (40) | |||||||||
| Structured_description | Concise_description | glb-1 encodes a globin; glb-1 transcription is uninduced by anoxia, but repressed by DAF-2 signalling in a DAF-16 dependent manner; glb-1 is expressed in distal germline, late embryonic cells that are probably hypodermal precursors, and young adults; glb-1 transcription is lower in L3 larvae than in adults, while in adults it is higher than that of most other globins; glb-1 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00002318 | |||||
| WBPaper00025067 | |||||||||
| WBPaper00027758 | |||||||||
| WBPaper00031066 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Dec 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable several functions, including heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to be involved in oxygen transport. Predicted to be located in cytoplasm. Expressed in VC neuron; germ line; head muscle; head neurons; and tail neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK637.13 | |||||||
| Corresponding_transcript | ZK637.13.1 | ||||||||
| Other_sequence (226) | |||||||||
| Associated_feature | WBsf651320 | ||||||||
| WBsf666432 | |||||||||
| WBsf227210 | |||||||||
| WBsf227211 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005897 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030275 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059584 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr95 | ||||||||
| Expr4063 | |||||||||
| Expr4890 | |||||||||
| Expr8514 | |||||||||
| Expr1027727 | |||||||||
| Expr1036278 | |||||||||
| Expr1163000 | |||||||||
| Expr2012055 | |||||||||
| Expr2030291 | |||||||||
| Drives_construct | WBCnstr00000434 | ||||||||
| WBCnstr00013343 | |||||||||
| WBCnstr00029368 | |||||||||
| Construct_product | WBCnstr00000434 | ||||||||
| WBCnstr00029368 | |||||||||
| Microarray_results | SMD_0ZK637.13 | ||||||||
| SMD_ZK637.13 | |||||||||
| 173475_s_at | |||||||||
| A_12_P110436 | |||||||||
| Aff_ZK637.13 | |||||||||
| GPL13394_WBGene00014030 | |||||||||
| GPL13914_ZK637.13 | |||||||||
| GPL14144_ZK637.13_264-323_0.927_11_B | |||||||||
| GPL14144_ZK637.13_352-411_0.967_1_A | |||||||||
| GPL14144_ZK637.13_67-126_0.929_10_C | |||||||||
| GPL19516_CGZ0057269 | |||||||||
| GPL19516_CGZ0057270 | |||||||||
| GPL21109_ZK637.13.1 | |||||||||
| GPL3518_CE00431 | |||||||||
| GPL8304_CE_WBGene00014030_A | |||||||||
| GPL8304_CE_WBGene00014030_C | |||||||||
| GPL8673_ZK637_13P00002 | |||||||||
| GPL8673_ZK637_13P00289 | |||||||||
| GPL8673_ZK637_13P00408 | |||||||||
| GPL9450_ZK637.13 | |||||||||
| cea2.c.25497 | |||||||||
| Expression_cluster (270) | |||||||||
| Interaction | WBInteraction000550168 | ||||||||
| WBInteraction000551903 | |||||||||
| WBInteraction000554023 | |||||||||
| WBInteraction000560832 | |||||||||
| WBInteraction000567740 | |||||||||
| WBInteraction000571805 | |||||||||
| WBInteraction000576297 | |||||||||
| WBInteraction000578002 | |||||||||
| WBInteraction000579413 | |||||||||
| Map_info | Map | III | Position | 0.043909 | Error | 0.001288 | |||
| Positive | Positive_clone | ZK637 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028430 | ||||||||
| WBPaper00031066 | |||||||||
| WBPaper00032254 | |||||||||
| WBPaper00036096 | |||||||||
| WBPaper00038269 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00054980 | |||||||||
| WBPaper00063976 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
