WormBase Tree Display for Gene: WBGene00017973
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| WBGene00017973 | SMap | S_parent | Sequence | F32A6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ift-81 | Person_evidence | WBPerson426 | |||||
| Sequence_name | F32A6.2 | ||||||||
| Molecular_name | F32A6.2 | ||||||||
| F32A6.2.1 | |||||||||
| CE41565 | |||||||||
| Other_name | CELE_F32A6.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ift-81 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Sep 2007 10:26:44 | WBPerson1849 | Event | Acquires_merge | WBGene00017972 | ||||
| Name_change | CGC_name | ift-81 | |||||||
| Acquires_merge | WBGene00017972 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ift | ||||||||
| Allele (143) | |||||||||
| Strain | WBStrain00002530 | ||||||||
| WBStrain00036344 | |||||||||
| WBStrain00036504 | |||||||||
| WBStrain00007576 | |||||||||
| WBStrain00051699 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (32) | |||||||||
| Structured_description | Concise_description | ift-81 encodes an ortholog of the intraflagellar transport component IFT-81 in Chlamydomonas; ift-81 along with ift-74 is involved in growth, chemotaxis, intraflagellar transport and the morphogenesis of cilia; ift-81 binds ift-74 in protein binding assays and co-localizes with ift-74 to the transition zone of cilia in neurons, indicating that ift-81 may form a complex with ift-74. | Paper_evidence | WBPaper00030726 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 27 Oct 2008 00:00:00 | ||||||||
| Automated_description | Enables microtubule binding activity. Involved in chemotaxis; detection of stimulus involved in sensory perception; and intraciliary transport. Located in non-motile cilium. Expressed in amphid neurons; chemosensory neurons; and phasmid neurons. Human ortholog(s) of this gene implicated in short-rib thoracic dysplasia 19 with or without polydactyly. Is an ortholog of human IFT81 (intraflagellar transport 81). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080295 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14313) | ||||
| Molecular_info | Corresponding_CDS | F32A6.2 | |||||||
| Corresponding_CDS_history | F32A6.2:wp99 | ||||||||
| F32A6.2:wp182 | |||||||||
| F32A6.2:wp191 | |||||||||
| F32A6.2:wp196 | |||||||||
| F32A6.2:wp213 | |||||||||
| Corresponding_transcript | F32A6.2.1 | ||||||||
| Other_sequence | EL890803.1 | ||||||||
| BM01040 | |||||||||
| Associated_feature (5) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031647 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046081 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046082 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014197 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4638 | ||||||||
| Expr5927 | |||||||||
| Expr8322 | |||||||||
| Expr1026677 | |||||||||
| Expr1037733 | |||||||||
| Expr1149971 | |||||||||
| Expr2012699 | |||||||||
| Expr2030935 | |||||||||
| Drives_construct | WBCnstr00003106 | ||||||||
| WBCnstr00012142 | |||||||||
| WBCnstr00013259 | |||||||||
| Construct_product | WBCnstr00013259 | ||||||||
| Microarray_results | SMD_F32A6.1 | ||||||||
| SMD_F32A6.2 | |||||||||
| 183495_at | |||||||||
| 183751_at | |||||||||
| A_12_P116402 | |||||||||
| A_12_P119726 | |||||||||
| A_12_P136181 | |||||||||
| A_12_P136185 | |||||||||
| A_12_P136186 | |||||||||
| A_12_P136187 | |||||||||
| Aff_F32A6.1 | |||||||||
| Aff_F32A6.2 | |||||||||
| GPL13394_WBGene00017973 | |||||||||
| GPL13914_F32A6.2 | |||||||||
| GPL14144_F32A6.2_1395-1454_0.766_55_B | |||||||||
| GPL14144_F32A6.2_166-225_0.811_35_C | |||||||||
| GPL14144_F32A6.2_1875-1934_0.950_1_A | |||||||||
| GPL19516_CGZ0011343 | |||||||||
| GPL19516_CGZ0019217 | |||||||||
| GPL21109_Cat_F32A6.2 | |||||||||
| GPL21109_F32A6.2 | |||||||||
| GPL3518_CE04469 | |||||||||
| GPL3518_CE30965 | |||||||||
| GPL8304_CE_WBGene00017972_A | |||||||||
| GPL8304_CE_WBGene00017972_B | |||||||||
| GPL8304_CE_WBGene00017973_A | |||||||||
| GPL8304_CE_WBGene00017973_B | |||||||||
| GPL8673_F32A6_1P00116 | |||||||||
| GPL8673_F32A6_1P00368 | |||||||||
| GPL8673_F32A6_1P00380 | |||||||||
| GPL8673_F32A6_2P00044 | |||||||||
| GPL8673_F32A6_2P00250 | |||||||||
| GPL8673_F32A6_2P00735 | |||||||||
| GPL9450_F32A6.1 | |||||||||
| GPL9450_F32A6.2 | |||||||||
| cea2.i.53411 | |||||||||
| cea2.p.143114 | |||||||||
| Expression_cluster (195) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | X | Position | -5.72774 | Error | 0.007898 | |||
| Positive | Positive_clone | F32A6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
