WormBase Tree Display for Gene: WBGene00022586
expand all nodes | collapse all nodes | view schema
| WBGene00022586 | SMap | S_parent | Sequence | ZC308 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZC308.4 | |||||||
| Molecular_name | ZC308.4a | ||||||||
| ZC308.4a.1 | |||||||||
| CE15165 | |||||||||
| ZC308.4b | |||||||||
| CE41742 | |||||||||
| ZC308.4b.1 | |||||||||
| Other_name | CELE_ZC308.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ZC308.4 | ||||||||
| DB_info | Database | AceView | gene | 1G945 | |||||
| WormQTL | gene | WBGene00022586 | |||||||
| WormFlux | gene | WBGene00022586 | |||||||
| NDB | locus_tag | CELE_ZC308.4 | |||||||
| NCBI | gene | 172336 | |||||||
| RefSeq | protein | NM_001129089.5 | |||||||
| NM_059438.5 | |||||||||
| TrEMBL | UniProtAcc | A8WIQ9 | |||||||
| H2L0E4 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0E4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1935 | ||||||||
| Ortholog (16) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; BAG; germ line; male distal tip cell; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including methylmercury hydroxide; rotenone; and manganese chloride based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC308.4a | |||||||
| ZC308.4b | |||||||||
| Corresponding_CDS_history | ZC308.4:wp183 | ||||||||
| Corresponding_transcript | ZC308.4a.1 | ||||||||
| ZC308.4b.1 | |||||||||
| Other_sequence | CRC05150_1 | ||||||||
| CR08332 | |||||||||
| Associated_feature | WBsf643362 | ||||||||
| WBsf217814 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004880 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00061955 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038011 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058830 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017967 | ||||||||
| Expr1039977 | |||||||||
| Expr1162266 | |||||||||
| Expr2008597 | |||||||||
| Expr2026833 | |||||||||
| Drives_construct | WBCnstr00024134 | ||||||||
| Construct_product | WBCnstr00024134 | ||||||||
| Microarray_results | SMD_ZC308.4 | ||||||||
| 181785_at | |||||||||
| A_12_P118509 | |||||||||
| Aff_ZC308.4 | |||||||||
| GPL13394_WBGene00022586 | |||||||||
| GPL13914_ZC308.4 | |||||||||
| GPL14144_ZC308.4a_434-493_0.915_15_A | |||||||||
| GPL14144_ZC308.4a_603-662_0.914_16_C | |||||||||
| GPL14144_ZC308.4a_667-726_0.940_4_B | |||||||||
| GPL19516_CGZ0055723 | |||||||||
| GPL19516_CGZ0055724 | |||||||||
| GPL21109_ZC308.4a | |||||||||
| GPL3518_CE15165 | |||||||||
| GPL8304_CE_WBGene00022586_A | |||||||||
| GPL8304_CE_WBGene00022586_B | |||||||||
| GPL8304_CE_WBGene00022586_C | |||||||||
| GPL8673_ZC308_4P00106 | |||||||||
| GPL8673_ZC308_4P00351 | |||||||||
| GPL8673_ZC308_4P00715 | |||||||||
| GPL9450_ZC308.4 | |||||||||
| cea2.p.25988 | |||||||||
| Expression_cluster (182) | |||||||||
| Interaction (158) | |||||||||
| Map_info | Positive | Positive_clone | ZC308 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 1.06458 | |||||||
| Method | Gene |
