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WormBase Tree Display for Gene: WBGene00031535

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Name Class

WBGene00031535SMapS_parentSequencecb25.fpc2234
IdentityVersion2
NameCGC_nameCbr-unc-16From_analysisInferred_from_orthology
Sequence_nameCBG10054
Molecular_nameCBG10054a
CBG10054a.1
CBP32293
CBG10054b
CBP47363
CBG10054c
CBP47347
CBG10054d
CBP47424
CBG10054e
CBP47476
CBG10054f
CBP47509
CBG10054g
CBP47532
CBG10054h
CBP47303
CBG10054i
CBP47383
CBG10054j
CBP47561
CBG10054k
CBP47574
CBG10054l
CBP47343
CBG10054m
CBP47386
CBG10054n
CBP47474
CBG10054o
CBP47463
CBG10054p
CBP47525
CBG10054q
CBP47302
CBG10054r
CBP47380
CBG10054s
CBP47495
CBG10054t
CBP47571
CBG10054u
CBP47344
CBG10054v
CBP47427
CBG10054w
CBP47492
CBG10054x
CBP47526
CBG10054y
CBP47301
CBG10054b.1
CBG10054c.1
CBG10054d.1
CBG10054e.1
CBG10054f.1
CBG10054g.1
CBG10054h.1
CBG10054i.1
CBG10054j.1
CBG10054k.1
CBG10054l.1
CBG10054m.1
CBG10054n.1
CBG10054o.1
CBG10054p.1
CBG10054q.1
CBG10054r.1
CBG10054s.1
CBG10054t.1
CBG10054u.1
CBG10054v.1
CBG10054w.1
CBG10054x.1
CBG10054y.1
Other_nameCBG_10054Accession_evidenceNDBHE601459
Public_nameCbr-unc-16
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-16
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000219.1264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
33.8834From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
37.2157From_analysisRNASeq.briggsae.WBls:0000002.control_mean
58.6373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
30.3419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
32.1127From_analysisRNASeq.briggsae.WBls:0000002.control_median
35.4972From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000329.4528From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
44.2783From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
59.1037From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
32.1026From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
40.2197From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000442.8616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
43.4131From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
43.9646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
39.2115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
42.7348From_analysisRNASeq.briggsae.WBls:0000004.control_mean
43.2467From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
44.3898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002710.6151From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
16.7316From_analysisRNASeq.briggsae.WBls:0000027.control_mean
35.2815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.2982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
22.9483From_analysisRNASeq.briggsae.WBls:0000027.control_median
26.8183From_analysisRNASeq.briggsae.WBls:0000027.control_mean
57.0782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003534.1145From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003819.3879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
28.7306From_analysisRNASeq.briggsae.WBls:0000038.control_median
30.7561From_analysisRNASeq.briggsae.WBls:0000038.control_mean
38.0733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
57.2874From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
8.27567From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004151.3971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
51.5834From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
52.3529From_analysisRNASeq.briggsae.WBls:0000041.control_median
52.6009From_analysisRNASeq.briggsae.WBls:0000041.control_mean
53.1224From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
54.3007From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
45.1972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
52.321From_analysisRNASeq.briggsae.WBls:0000041.control_mean
58.3252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006316.2032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
16.9831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
18.7804From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
20.8751From_analysisRNASeq.briggsae.WBls:0000063.control_mean
21.247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
31.1617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.0137From_analysisRNASeq.briggsae.WBls:0000063.control_median
21.9076From_analysisRNASeq.briggsae.WBls:0000063.control_mean
27.0705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010134.0784From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
34.1145From_analysisRNASeq.briggsae.total_over_all_stages.control_median
35.9273From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
36.6774From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00135053
Contained_in_operonCBOPA0326
OrthologWBGene00006755Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00055072Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00155354Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CBOVI.g4785Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11960Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g11962Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g8331Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13081Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14075Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3247Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25794Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10771Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g11106Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16677Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19327Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g28896Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8986Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3391Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00420.g10607Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00420.g10608Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-16Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18365Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00327.g9470Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07385Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009458Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03995Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7946Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30194800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00227885Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8646Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00180758Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00245554Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00098027Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00261014Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293684Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable MAP-kinase scaffold activity. Is an ortholog of C. elegans unc-16. In C. elegans, unc-16 is involved in several processes, including defecation; egg-laying behavior; and regulation of JNK cascade.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS (25)
Corresponding_CDS_historyCBG10054:bp194
Corresponding_transcript (25)
Other_sequenceACC06795_1
JO472375.1
SRC09322_1
Tcir_isotig28611
JI165046.1
FF678842.1
FK809211.1
FE911952.1
Dviv_isotig09852
BM00818
CRC04177_1
FC540108.1
JI164967.1
JI479761.1
JI466840.1
FC552533.1
Tcol_isotig09960
HG00390
ES272948.1
JI482653.1
HBC04940_1
TM02073
TSC12465_1
CR08132
Tcol_isotig20122
SRC04651_1
JI170505.1
JO470038.1
JI476939.1
Acan_isotig07781
ACC21273_1
Dviv_isotig09853
MIC02311_1
JI461688.1
BE191646.1
TMC01839_1
RSC01640_1
SSC03939_1
CRC02473_1
Hbac_isotig02332
FC821946.1
AM744248.1
JI474292.1
Oden_isotig18789
JI481874.1
Oden_isotig27988
Oden_isotig19058
FC542608.1
CR08371
RS07074
Dviv_isotig22163
BMC13064_1
JI470548.1
FC552215.1
Dviv_isotig09854
SRC05276_1
FC552042.1
BXC05978_1
ASC01858_1
AS00685
OVC02991_1
SR03943
FE911058.1
FC813227.1
BMC07339_1
SS01454
CJC00626_1
JI166846.1
OVC03630_1
EW741172.1
AW355767.1
SS02496
SSC00015_1
FK802446.1
JI472155.1
TDC03085_1
MI02804
FC821330.1
HGC11317_1
JI462519.1
JI177924.1
FC819043.1
AW519333.1
JI483019.1
ES741383.1
FC552232.1
Experimental_infoExpr_patternExpr1050866
Microarray_resultsGPL8303_CB6_WBGene00031535_A
GPL8303_CB6_WBGene00031535_B
GPL14143_CBG10054_2176-2235_0.865_55_C
GPL14143_CBG10054_2242-2301_0.866_54_A
GPL14143_CBG10054_3428-3487_0.923_6_B
MethodGene