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WormBase Tree Display for Gene: WBGene00004202

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Name Class

WBGene00004202EvidenceCGC_data_submission
SMapS_parentSequenceC37A5
IdentityVersion1
NameCGC_namepry-1Person_evidenceWBPerson1157
Sequence_nameC37A5.9
Molecular_nameC37A5.9
C37A5.9.1
CE30125
Other_nameAxinPaper_evidenceWBPaper00044307
CELE_C37A5.9Accession_evidenceNDBBX284601
Public_namepry-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpry
Allele (164)
Possibly_affected_byWBVar02153203
Legacy_information[Maloof JN] pry for polyray. Adult males make no alae but instead have ectopic rays. Hermaphrodites are sometimes Muv. The descendants of QR stay in the posterior. The postderid is often missing. Causes late ectopic expression of lin-39, mab-5, and egl-5.
[C.elegansII] mu38 : adult males make no alae but instead have ectopic rays. Hermaphrodites are sometimes Muv. The descendants of QR stay in the posterior. The postderid is often missing. Causes late ectopic expression of lin-39, mab-5, and egl-5. See also spy. [CF]
StrainWBStrain00023614
WBStrain00030966
WBStrain00004827
WBStrain00024333
WBStrain00047536
RNASeq_FPKM (74)
GO_annotation (59)
OrthologWBGene00056086Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00038147Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00148232Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00134292Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00222903Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10489Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16079Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20988Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g3822Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g11862Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20418Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5986Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3325Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13971Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g19780Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21698Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00625.g12928Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-pry-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold525.g3021Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00333.g9583Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_21973Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001754Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09801Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g3918Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10021700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2869Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237233Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00261325Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0026597Drosophila melanogasterFrom_analysisInparanoid
Panther
ZFIN:ZDB-GENE-000403-1Danio rerioFrom_analysisInparanoid
Panther
ZFIN:ZDB-GENE-000403-2Danio rerioFrom_analysisInparanoid
Panther
MGI:1096327Mus musculusFrom_analysisInparanoid
Panther
MGI:1270862Mus musculusFrom_analysisInparanoid
Panther
RGD:69259Rattus norvegicusFrom_analysisInparanoid
Panther
RGD:620859Rattus norvegicusFrom_analysisInparanoid
Panther
Structured_descriptionConcise_descriptionpry-1 encodes a protein containing RGS and DIX domains that is distantly related to members of the Axin family of proteins that function as part of a complex that targets beta-catenin for destruction in the absence of Wnt signaling; during C. elegans development, PRY-1 functions as a negative regulator of Wnt signaling pathways that specify cell fates during asymmetric cell division; in addition, pry-1 has been shown to have a role in axon guidance; PRY-1 physically interacts with BAR-1, SGG-1, APR-1, and AXL-1; PRY-1 reporter fusion proteins are expressed in hypodermal and neuronal lineages where they typically localize asymmetrically to the anterior cortex.Paper_evidenceWBPaper00003383
WBPaper00005278
WBPaper00028984
WBPaper00029082
WBPaper00030820
Curator_confirmedWBPerson1843
Date_last_updated02 Feb 2009 00:00:00
Automated_descriptionEnables ubiquitin ligase-substrate adaptor activity. Involved in several processes, including axon guidance; negative regulation of vulval development; and proteasome-mediated ubiquitin-dependent protein catabolic process. Located in cell cortex; membrane; and nucleus. Part of beta-catenin destruction complex. Expressed in several structures, including QL.a; hypodermal cell; neurons; ventral cord blast cell; and vulval precursor cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC37A5.9
Corresponding_CDS_historyC37A5.9:wp71
Corresponding_transcriptC37A5.9.1
Other_sequence (14)
Associated_featureWBsf665111
WBsf986083
WBsf1011197
WBsf220586
WBsf220587
WBsf220588
Experimental_infoRNAi_result (63)
Expr_pattern (12)
Drives_constructWBCnstr00000302
WBCnstr00000614
WBCnstr00012109
WBCnstr00016100
WBCnstr00019338
WBCnstr00022520
WBCnstr00042081
WBCnstr00042220
Construct_productWBCnstr00012109
WBCnstr00016100
WBCnstr00042081
WBCnstr00042082
WBCnstr00042083
WBCnstr00042084
WBCnstr00042220
Regulate_expr_clusterWBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00057033:pry-1(mu38)_downregulated
WBPaper00057033:pry-1(mu38)_upregulated
Microarray_results (21)
Expression_cluster (107)
Interaction (191)
Map_infoMapIPosition23.6118Error0.064259
Well_ordered
PositivePositive_cloneC37A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point3241
3242
4451
4793
Pos_neg_data8537
Reference (88)
PictureWBPicture0000013083
RemarkSequence connection from [Korswagen H]
MethodGene