WormBase Tree Display for Gene: WBGene00006005
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WBGene00006005 | SMap | S_parent | Sequence | F07F6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | srx-114 | Person_evidence | WBPerson522 | |||||
Sequence_name | F07F6.9 | ||||||||
Molecular_name | F07F6.9 | ||||||||
F07F6.9.1 | |||||||||
CE36528 | |||||||||
Other_name | CELE_F07F6.9 | Accession_evidence | NDB | BX284602 | |||||
Public_name | srx-114 | ||||||||
DB_info | Database | AceView | gene | 2F722 | |||||
WormQTL | gene | WBGene00006005 | |||||||
WormFlux | gene | WBGene00006005 | |||||||
NDB | locus_tag | CELE_F07F6.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006005|UniProtKB=Q8WQF6 | |||||||
family | PTHR47754 | ||||||||
NCBI | gene | 259893 | |||||||
RefSeq | protein | NM_170992.4 | |||||||
TREEFAM | TREEFAM_ID | TF315574 | |||||||
TrEMBL | UniProtAcc | Q8WQF6 | |||||||
UniProt_GCRP | UniProtAcc | Q8WQF6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srx | ||||||||
Allele (26) | |||||||||
Strain | WBStrain00003702 | ||||||||
WBStrain00003703 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00085249 | ||||||||
Ortholog | WBGene00153412 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00057366 | Caenorhabditis remanei | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00025457 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
OrthoMCL | |||||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00164196 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
CBOVI.g1802 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP28.g8393 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g14638 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP39.g17983 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP39.g20343 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP39.g21154 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
FL83_06054 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_006027 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g4499 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00121640 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||||
WBGene00277612 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00279384 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Paralog (94) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F07F6.9 | |||||||
Corresponding_CDS_history | F07F6.9:wp120 | ||||||||
Corresponding_transcript | F07F6.9.1 | ||||||||
Associated_feature | WBsf987882 | ||||||||
Experimental_info | RNAi_result | WBRNAi00043916 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012834 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043923 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr5674 | ||||||||
Expr5675 | |||||||||
Expr1029015 | |||||||||
Expr1147896 | |||||||||
Expr2016805 | |||||||||
Expr2034979 | |||||||||
Drives_construct | WBCnstr00004138 | ||||||||
WBCnstr00004139 | |||||||||
WBCnstr00034600 | |||||||||
Construct_product | WBCnstr00034600 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (40) | |||||||||
Map_info | Map | II | Position | -1.59751 | Error | 0.016351 | |||
Positive | Positive_clone | F07F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |