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WormBase Tree Display for Gene: WBGene00006682

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Name Class

WBGene00006682EvidencePerson_evidenceWBPerson655
SMapS_parentSequenceF36A2
IdentityVersion1
NameCGC_nametwk-30Person_evidenceWBPerson655
Sequence_nameF36A2.4
Molecular_nameF36A2.4
F36A2.4.1
CE42822
Other_nameCELE_F36A2.4Accession_evidenceNDBBX284601
Public_nametwk-30
DB_infoDatabaseAceViewgene1J386
WormQTLgeneWBGene00006682
WormFluxgeneWBGene00006682
NDBlocus_tagCELE_F36A2.4
PanthergeneCAEEL|WormBase=WBGene00006682|UniProtKB=P90863
familyPTHR11003
NCBIgene185335
RefSeqproteinNM_059980.7
TrEMBLUniProtAccP90863
UniProt_GCRPUniProtAccP90863
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:41WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtwk
Allele (30)
StrainWBStrain00031939
RNASeq_FPKM (74)
GO_annotation (11)
Contained_in_operonCEOP1504
OrthologWBGene00059998Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00033331Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00134502Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00152403Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00143326Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00147150Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00064316Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00304803Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9195Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16197Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10133Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g10134Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1586Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17582Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7731Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5525Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g19197Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5366Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24239Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00541.g12030Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05257.g19472Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g2198Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g2199Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20544Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_05659.g35363Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05083Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002522Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08814Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17154Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10123510Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1678Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00180628Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00246683Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00114808Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00267248Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287879Trichuris murisFrom_analysisWormBase-Compara
SGD:S000003629Saccharomyces cerevisiaeFrom_analysisOrthoInspector
Panther
SonicParanoid
Paralog (47)
Structured_descriptionAutomated_descriptionPredicted to enable outward rectifier potassium channel activity and potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to be located in membrane. Expressed in DD neuron; motor neurons; neurons; and ventral cord neurons.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF36A2.4
Corresponding_CDS_historyF36A2.4:wp101
F36A2.4:wp192
Corresponding_transcriptF36A2.4.1
Other_sequence (20)
Associated_featureWBsf649421
WBsf664604
WBsf664605
WBsf219986
Experimental_infoRNAi_resultWBRNAi00003605Inferred_automaticallyRNAi_primary
WBRNAi00046445Inferred_automaticallyRNAi_primary
WBRNAi00031827Inferred_automaticallyRNAi_primary
Expr_patternExpr1374
Expr4853
Expr10602
Expr1014125
Expr1032774
Expr1150314
Expr2017657
Expr2035797
Drives_constructWBCnstr00010248
WBCnstr00012281
WBCnstr00017030
Construct_productWBCnstr00010248
WBCnstr00016675
Microarray_results (18)
Expression_cluster (110)
Map_infoMapIPosition3.16331Error0.006374
PositivePositive_cloneF36A2Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5011
4425
5566
Pseudo_map_position
ReferenceWBPaper00024163
WBPaper00025141
WBPaper00026748
WBPaper00038491
WBPaper00055090
WBPaper00064001
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene