WormBase Tree Display for Gene: WBGene00006712

WBGene00006712 SMap: S_parent: Sequence: B0403
  Identity: Version: 1
    Name: CGC_name: ubc-17 Person_evidence: WBPerson89
      Sequence_name: B0403.2
      Molecular_name: B0403.2
        B0403.2.1
        CE47666
      Other_name: CELE_B0403.2 Accession_evidence: NDB BX284606
      Public_name: ubc-17
    DB_info: Database: AceView gene XH675
        WormQTL gene WBGene00006712
        WormFlux gene WBGene00006712
        NDB locus_tag CELE_B0403.2
        Panther gene CAEEL|WormBase=WBGene00006712|UniProtKB=Q11076
          family PTHR46116
        NCBI gene 181979
        RefSeq protein NM_076787.6
        SwissProt UniProtAcc Q11076
        TREEFAM TREEFAM_ID TF325556
        UniProt_GCRP UniProtAcc Q11076
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ubc
    Allele (93)
    Strain: WBStrain00037111
      WBStrain00007635
      WBStrain00007641
      WBStrain00047454
      WBStrain00031034
      WBStrain00031030
      WBStrain00055456
    RNASeq_FPKM (74)
    GO_annotation: 00057120
      00057121
      00057122
      00057123
      00057124
      00057125
    Ortholog: WBGene00051390 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032188 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144591 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00115885 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00127958 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222051 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2824 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g8073 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8988 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15028 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2786 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20622 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5603 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10945 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7709 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2169 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00514.g11737 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ubc-17 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold578.g4515 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00029.g1632 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00249 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024694 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04492 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20934 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0199000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19342 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239642 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00264492 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287078 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0266717 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-091202-7 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:13516 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1276108 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1307247 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
    Paralog: WBGene00000250 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable cysteine-type endopeptidase inhibitor activity and ubiquitin conjugating enzyme activity. Predicted to be involved in negative regulation of apoptotic process. Predicted to be located in nucleus. Is an ortholog of human BIRC6 (baculoviral IAP repeat containing 6). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0403.2
    Corresponding_CDS_history: B0403.2:wp133
      B0403.2:wp230
    Corresponding_transcript: B0403.2.1
    Other_sequence (40)
    Associated_feature: WBsf1005714
      WBsf1005715
      WBsf1005716
      WBsf1005717
      WBsf1023175
      WBsf1023176
      WBsf1023177
      WBsf235897
  Experimental_info: RNAi_result: WBRNAi00082813 Inferred_automatically: RNAi_primary
      WBRNAi00028125 Inferred_automatically: RNAi_primary
      WBRNAi00111002 Inferred_automatically: RNAi_primary
      WBRNAi00076052 Inferred_automatically: RNAi_primary
      WBRNAi00009751 Inferred_automatically: RNAi_primary
      WBRNAi00039024 Inferred_automatically: RNAi_primary
      WBRNAi00094707 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018009
      Expr1032795
      Expr1143185
      Expr2017703
      Expr2035841
    Drives_construct: WBCnstr00034200
    Construct_product: WBCnstr00034200
    Microarray_results (24)
    Expression_cluster (108)
  Map_info: Map: X Position: -1.89794
    Positive: Positive_clone: B0403 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005337
    WBPaper00027315
    WBPaper00033175
    WBPaper00038491
    WBPaper00055090
  Remark: Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb.
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene