WormBase Tree Display for Gene: WBGene00007217

WBGene00007217 SMap: S_parent: Sequence: C01A2
  Identity: Version: 2
    Name: CGC_name: tads-1 Person_evidence: WBPerson2264
      Sequence_name: C01A2.5
      Molecular_name: C01A2.5
        C01A2.5.1
        CE07787
      Other_name: CELE_C01A2.5 Accession_evidence: NDB BX284601
      Public_name: tads-1
    DB_info: Database: AceView gene 1N977
        WormQTL gene WBGene00007217
        WormFlux gene WBGene00007217
        NDB locus_tag CELE_C01A2.5
        Panther gene CAEEL|WormBase=WBGene00007217|UniProtKB=O02209
          family PTHR12775
        NCBI gene 173206
        RefSeq protein NM_060954.8
        TREEFAM TREEFAM_ID TF314621
        TrEMBL UniProtAcc O02209
        UniProt_GCRP UniProtAcc O02209
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 27 Jun 2014 15:53:55 WBPerson2970 Name_change: CGC_name: tads-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tads
    Allele (68)
    Strain: WBStrain00037727
    RNASeq_FPKM (74)
    GO_annotation: 00026739
      00115430
    Contained_in_operon: CEOP1696
    Ortholog: WBGene00056057 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039384 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00154034 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00128687 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00098823 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00210832 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00222121 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g2564 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13267 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22804 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g12051 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4471 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3339 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5436 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2569 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00483.g11372 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-tads-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17874 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00720.g14775 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_20320 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001720 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09818 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g23743 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10281410 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2719 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237493 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00258502 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00289261 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0032290 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-4825 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:15890 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1913654 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1311072 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to be involved in mitotic DNA replication termination. Predicted to be located in nucleus. Is an ortholog of human RTF2 (replication termination factor 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C01A2.5
    Corresponding_transcript: C01A2.5.1
    Other_sequence (84)
    Associated_feature: WBsf643799
      WBsf979007
      WBsf985851
      WBsf1011064
      WBsf218720
  Experimental_info: RNAi_result (41)
    Expr_pattern: Expr1014715
      Expr1033111
      Expr1143372
      Expr2017204
      Expr2035340
    Drives_construct: WBCnstr00033913
    Construct_product: WBCnstr00033913
    Microarray_results (21)
    Expression_cluster (89)
    Interaction (18)
  Map_info: Map: I Position: 19.5106
    Positive: Positive_clone: C01A2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026498
    WBPaper00030887
    WBPaper00038491
    WBPaper00048493
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene