WormBase Tree Display for Gene: WBGene00007226

WBGene00007226 SMap: S_parent: Sequence: C01G6
  Identity: Version: 1
    Name: Sequence_name: C01G6.4
      Molecular_name: C01G6.4
        C01G6.4.1
        CE00866
      Other_name: CELE_C01G6.4 Accession_evidence: NDB BX284602
      Public_name: C01G6.4
    DB_info: Database: AceView gene 2J562
        WormQTL gene WBGene00007226
        WormFlux gene WBGene00007226
        NDB locus_tag CELE_C01G6.4
        Panther gene CAEEL|WormBase=WBGene00007226|UniProtKB=Q17573
          family PTHR46359
        NCBI gene 182077
        RefSeq protein NM_001393150.1
        TREEFAM TREEFAM_ID TF318022
        TrEMBL UniProtAcc Q17573
        UniProt_GCRP UniProtAcc Q17573
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (26)
    Strain: WBStrain00055359
    RNASeq_FPKM (74)
    GO_annotation: 00058545
      00058546
      00058547
      00058548
    Contained_in_operon: CEOP2733
    Ortholog: WBGene00024199 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00160227 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00137217 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00222147 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g6780 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g22055 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14341 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21945 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g4212 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6551 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8474 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22833 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-C01G6.4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold562.g3952 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_04759.g33669 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05509 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_004348 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02363 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3102 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20300600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5444 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00246739 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00266989 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288434 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0052850 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1277 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050913-69 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:10056 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1352759 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2321596 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00022356 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00022115 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be part of ubiquitin ligase complex. Expressed in body wall musculature; intestine; neurons; and non-striated muscle. Is an ortholog of human RNF11 (ring finger protein 11). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C01G6.4
    Corresponding_transcript: C01G6.4.1
    Other_sequence (26)
    Associated_feature: WBsf655338
      WBsf989005
      WBsf989006
      WBsf223625
      WBsf223626
  Experimental_info: RNAi_result: WBRNAi00084230 Inferred_automatically: RNAi_primary
      WBRNAi00039355 Inferred_automatically: RNAi_primary
      WBRNAi00076067 Inferred_automatically: RNAi_primary
      WBRNAi00063620 Inferred_automatically: RNAi_primary
      WBRNAi00094729 Inferred_automatically: RNAi_primary
      WBRNAi00028304 Inferred_automatically: RNAi_primary
      WBRNAi00009951 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4840
      Expr1013606
      Expr1033117
      Expr1143471
      Expr2000311
      Expr2018535
    Drives_construct: WBCnstr00012268
      WBCnstr00033905
    Construct_product: WBCnstr00033905
    Microarray_results (17)
    Expression_cluster (108)
    Interaction (28)
  Map_info: Positive: Positive_clone: C01G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 1.0978
  Reference: WBPaper00027315
    WBPaper00030839
    WBPaper00038491
    WBPaper00055090
  Method: Gene