WormBase Tree Display for Gene: WBGene00008288

WBGene00008288 SMap: S_parent: Sequence: C54C6
  Identity: Version: 2
    Name: CGC_name: cfap-20 Person_evidence: WBPerson2136
            WBPerson11843
      Sequence_name: C54C6.6
      Molecular_name: C54C6.6
        C54C6.6.1
        CE33367
      Other_name: CELE_C54C6.6 Accession_evidence: NDB BX284603
      Public_name: cfap-20
    DB_info: Database: AceView gene 3E626
        WormQTL gene WBGene00008288
        WormFlux gene WBGene00008288
        NDB locus_tag CELE_C54C6.6
        Panther gene CAEEL|WormBase=WBGene00008288|UniProtKB=Q86D25
          family PTHR12458
        NCBI gene 353416
        RefSeq protein NM_181977.3
        SwissProt UniProtAcc Q86D25
        TREEFAM TREEFAM_ID TF313405
        UniProt_GCRP UniProtAcc Q86D25
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 13 Oct 2023 01:37:05 WBPerson51134 Name_change: CGC_name: cfap-20
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cfap
    Allele (47)
    RNASeq_FPKM (74)
    GO_annotation (22)
    Contained_in_operon: CEOP3820
    Ortholog: WBGene00054825 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00031282 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00142045 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00133125 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00114809 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00223182 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5789 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5983 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3776 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g85 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g975 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g13427 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1133 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6314 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5377 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8166 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00287.g8536 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C54C6.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9510 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9514 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00523.g12436 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10273 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009715 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09240 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g4078 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30222800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7273 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00246635 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00266993 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288796 Trichuris muris From_analysis: WormBase-Compara
      WBGene00291108 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296286 Trichuris muris From_analysis: WormBase-Compara
      WBGene00300089 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0032248 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1784 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:29523 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:107428 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1308493 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00009901 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in cilium assembly; positive regulation of feeding behavior; and regulation of cell motility. Predicted to be located in microtubule cytoskeleton and motile cilium. Is an ortholog of human CFAP20 (cilia and flagella associated protein 20). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C54C6.6
    Corresponding_transcript: C54C6.6.1
    Other_sequence (46)
    Associated_feature: WBsf650913
      WBsf991801
      WBsf991802
      WBsf1014582
      WBsf226361
  Experimental_info: Expr_pattern: Expr1024956
      Expr1033598
      Expr1147083
      Expr2001905
      Expr2020129
    Drives_construct: WBCnstr00033081
    Construct_product: WBCnstr00033081
    Microarray_results (12)
    Expression_cluster (106)
    Interaction: WBInteraction000171977
      WBInteraction000466960
      WBInteraction000552576
      WBInteraction000566888
      WBInteraction000567660
  Map_info: Map: III Position: -5.87001
    Positive: Positive_clone: C54C6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00064662
    WBPaper00065813
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene