WormBase Tree Display for Gene: WBGene00008940

WBGene00008940 SMap: S_parent: Sequence: F18H3
  Identity: Version: 1
    Name: Sequence_name: F18H3.4
      Molecular_name: F18H3.4
        F18H3.4.1
        CE23671
      Other_name: CELE_F18H3.4 Accession_evidence: NDB BX284606
      Public_name: F18H3.4
    DB_info: Database: AceView gene XO149
        WormQTL gene WBGene00008940
        WormFlux gene WBGene00008940
        NDB locus_tag CELE_F18H3.4
        Panther gene CAEEL|WormBase=WBGene00008940|UniProtKB=Q19580
          family PTHR31027
        NCBI gene 181474
        RefSeq protein NM_077860.7
        TREEFAM TREEFAM_ID TF317328
        TrEMBL UniProtAcc Q19580
        UniProt_GCRP UniProtAcc Q19580
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (57)
    RNASeq_FPKM (74)
    GO_annotation: 00065237
      00065238
      00065239
      00065240
      00065241
      00065242
      00105627
    Ortholog: WBGene00147627 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029485 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065265 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00109654 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00123631 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00229507 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g11912 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15628 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7879 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18219 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5225 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19200 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14072 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g479 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g188 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3943 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00055.g2843 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g26152 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g22071 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00457.g11631 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01605 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025726 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01838 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_X0126020 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20430 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239573 Onchocerca volvulus From_analysis: WormBase-Compara
      SGD:S000005724 Saccharomyces cerevisiae From_analysis: Hieranoid
            Panther
    Paralog: WBGene00044342 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to enable mRNA binding activity. Involved in IRE1-mediated unfolded protein response and innate immune response. Predicted to be located in endoplasmic reticulum and nuclear outer membrane-endoplasmic reticulum membrane network. Predicted to be part of ribonucleoprotein complex. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F18H3.4
    Corresponding_transcript: F18H3.4.1
    Other_sequence: CBC17093_1
      OFC00612_1
    Associated_feature: WBsf648675
      WBsf1007637
      WBsf1007638
      WBsf1007639
      WBsf1024248
      WBsf236576
      WBsf236577
  Experimental_info: RNAi_result: WBRNAi00031113 Inferred_automatically: RNAi_primary
      WBRNAi00044974 Inferred_automatically: RNAi_primary
      WBRNAi00013530 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028942
      Expr1033894
      Expr1148944
      Expr2002726
      Expr2020942
    Drives_construct: WBCnstr00032578
    Construct_product: WBCnstr00032578
    Microarray_results (20)
    Expression_cluster (139)
    Interaction (13)
  Map_info: Positive: Positive_clone: F18H3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 12.694
  Method: Gene