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WormBase Tree Display for Gene: WBGene00009368

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Name Class

WBGene00009368SMapS_parentSequenceF33H2
IdentityVersion2
NameCGC_namepole-1Person_evidenceWBPerson320
WBPerson30839
Sequence_nameF33H2.5
Molecular_nameF33H2.5
F33H2.5.1
CE17767
Other_nameCELE_F33H2.5Accession_evidenceNDBBX284601
Public_namepole-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
214 Apr 2015 09:52:28WBPerson2970Name_changeCGC_namepole-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpole
Allele (109)
Possibly_affected_byWBVar02152931
StrainWBStrain00001140
WBStrain00035526
WBStrain00054796
RNASeq_FPKM (74)
GO_annotation (33)
OrthologWBGene00061178Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00038925Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00164400Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00192859Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00192379Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00224070Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10230Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3920Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g3922Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7351Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10219Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g10220Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g10221Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g10224Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g21043Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g7647Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g8217Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21279Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g5788Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g12530Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3901Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11023Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10365Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g18183Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g5971Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8392Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g7345Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00072.g3420Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00072.g3422Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-pole-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g3822Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20973Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00434.g11313Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19319Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_003592Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13383Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21410Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10008600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g3000Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00127252Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129602Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00208884Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00238406Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00117346Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259333Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290619Trichuris murisFrom_analysisWormBase-Compara
SGD:S000005206Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0264326Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-070705-557Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:9177Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1196391Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1594540Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity; DNA-directed DNA polymerase activity; and single-stranded DNA 3'-5' DNA exonuclease activity. Predicted to be involved in DNA metabolic process and mitotic cell cycle. Predicted to be located in nucleus. Predicted to be part of epsilon DNA polymerase complex. Human ortholog(s) of this gene implicated in ascending colon cancer; carcinoma (multiple); and mismatch repair cancer syndrome. Is an ortholog of human POLE (DNA polymerase epsilon, catalytic subunit).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:9256Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9177)
DOID:3908Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9177)
DOID:2871Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9177)
DOID:218Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9177)
DOID:1324Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9177)
DOID:3907Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9177)
DOID:1380Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9177)
DOID:0112182Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9177)
Molecular_info (4)
Experimental_infoRNAi_result (14)
Expr_patternExpr5945
Expr1013626
Expr1034102
Expr1150129
Expr2014990
Expr2033225
Drives_constructWBCnstr00002036
WBCnstr00032247
Construct_productWBCnstr00032247
Microarray_results (19)
Expression_cluster (155)
Interaction (164)
Map_infoMapIPosition29.2714
PositivePositive_cloneF33H2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00023755
WBPaper00026064
WBPaper00029334
WBPaper00038491
WBPaper00055090
WBPaper00062439
WBPaper00064339
WBPaper00066002
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene