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WormBase Tree Display for Gene: WBGene00009431

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Name Class

WBGene00009431SMapS_parentSequenceF35E12
IdentityVersion2
NameCGC_namedct-17Paper_evidenceWBPaper00031095
Person_evidenceWBPerson1157
Sequence_nameF35E12.7
Molecular_name (12)
Other_nameCELE_F35E12.7Accession_evidenceNDBBX284605
Public_namedct-17
DB_infoDatabaseWormQTLgeneWBGene00009431
WormFluxgeneWBGene00009431
NDBlocus_tagCELE_F35E12.7
PanthergeneCAEEL|WormBase=WBGene00009431|UniProtKB=O02360
familyPTHR21447
NCBIgene179865
RefSeqproteinNM_001028708.6
NM_001028706.7
NM_001028709.5
NM_001028707.6
TREEFAMTREEFAM_IDTF316592
TrEMBLUniProtAccQ52GY1
O02360
Q52GY0
Q52GX8
UniProt_GCRPUniProtAccO02360
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
208 Nov 2007 16:33:50WBPerson2970Name_changeCGC_namedct-17
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdct
Allele (83)
RNASeq_FPKM (74)
GO_annotation00027144
00027145
00027146
00027147
00027148
OrthologWBGene00052866Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00032607Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00153028Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00136453Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00057832Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00138857Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00194000Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00147711Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00135719Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00072566Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00068261Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00179773Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g880Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g9986Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20641Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g20642Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g21251Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g5209Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g5210Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18759Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18760Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g6365Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2668Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2669Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2670Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2671Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2674Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2675Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7060Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g18605Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8256Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8662Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g7689Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_V.g16336Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14114Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00285.g8688Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00285.g8690Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00288.g8753Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00751.g15113Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02903.g28332Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12932Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_20506Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_018642Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_019507Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020528Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_50166200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g16312Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00130111Caenorhabditis japonicaFrom_analysisWormBase-Compara
Paralog (17)
Structured_descriptionAutomated_descriptionInvolved in defense response to Gram-negative bacterium and innate immune response. Located in membrane raft.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF35E12.7a
F35E12.7b
F35E12.7c
F35E12.7d
Corresponding_CDS_historyF35E12.7:wp142
Corresponding_transcriptF35E12.7a.1
F35E12.7b.1
F35E12.7c.1
F35E12.7d.1
Other_sequenceCJC00920_1
Associated_featureWBsf1001882
WBsf1020760
WBsf234854
Experimental_infoRNAi_result (7)
Expr_patternExpr1017736
Expr1150227
Expr2010816
Expr2029053
Drives_constructWBCnstr00032192
Construct_productWBCnstr00032192
Microarray_results (30)
Expression_cluster (319)
InteractionWBInteraction000383133
WBInteraction000438155
Map_infoMapVPosition5.58631Error0.000175
PositivePositive_cloneF35E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028482
WBPaper00031095
WBPaper00032196
WBPaper00032370
WBPaper00034005
WBPaper00037777
WBPaper00058665
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene