WormBase Tree Display for Gene: WBGene00011359

WBGene00011359 SMap: S_parent: Sequence: T01H10
  Identity: Version: 2
    Name: CGC_name: lgc-17 Paper_evidence: WBPaper00029376
          Person_evidence: WBPerson1430
      Sequence_name: T01H10.6
      Molecular_name: T01H10.6
        T01H10.6.1
        CE36665
      Other_name: CELE_T01H10.6 Accession_evidence: NDB BX284606
      Public_name: lgc-17
    DB_info: Database: AceView gene XM743
        WormQTL gene WBGene00011359
        WormFlux gene WBGene00011359
        NDB locus_tag CELE_T01H10.6
        Panther gene CAEEL|WormBase=WBGene00011359|UniProtKB=Q22085
          family PTHR18945
        NCBI gene 187976
        RefSeq protein NM_077627.2
        TREEFAM TREEFAM_ID TF319821
        TrEMBL UniProtAcc Q22085
        UniProt_GCRP UniProtAcc Q22085
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 18 May 2007 16:58:23 WBPerson2970 Name_change: CGC_name: lgc-17
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    Allele (68)
    Strain: WBStrain00051094
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog: WBGene00036241 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            WormBase-Compara
      WBGene00106841 Pristionchus pacificus From_analysis: OMA
      WBGene00192940 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00103670 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00096139 Pristionchus pacificus From_analysis: OMA
      CBOVI.g11818 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10142 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g6552 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP28.g17926 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g17927 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g3261 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10161 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g6154 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g15229 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g15230 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12110 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13269 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g13271 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g13272 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g14918 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g26481 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g26482 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11694 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00206.g6984 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00835.g14480 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g22524 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_01643.g22268 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_023137 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09580 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13878 Panagrellus redivivus From_analysis: WormBase-Compara
      chrX_pilon.g20196 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00063281 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog (100)
    Structured_description: Automated_description: Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T01H10.6
    Corresponding_CDS_history: T01H10.6:wp124
    Corresponding_transcript: T01H10.6.1
    Associated_feature: WBsf1007214
      WBsf1007215
      WBsf1023991
      WBsf1023992
  Experimental_info: RNAi_result: WBRNAi00066368 Inferred_automatically: RNAi_primary
      WBRNAi00052170 Inferred_automatically: RNAi_primary
      WBRNAi00017997 Inferred_automatically: RNAi_primary
      WBRNAi00017998 Inferred_automatically: RNAi_primary
      WBRNAi00066367 Inferred_automatically: RNAi_primary
      WBRNAi00102744 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1155801
    Drives_construct: WBCnstr00030716
    Construct_product: WBCnstr00030716
    Microarray_results (13)
    Expression_cluster (25)
    Interaction: WBInteraction000205952
      WBInteraction000210545
      WBInteraction000212286
      WBInteraction000217636
      WBInteraction000257809
      WBInteraction000299467
      WBInteraction000306824
      WBInteraction000384843
  Map_info: Map: X Position: 7.00637
    Positive: Positive_clone: T01H10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene