WormBase Tree Display for Gene: WBGene00013517

WBGene00013517 SMap: S_parent: Sequence: Y73F8A
  Identity: Version: 2
    Name: CGC_name: lgc-52 Person_evidence: WBPerson2536
            WBPerson1430
      Sequence_name: Y73F8A.2
      Molecular_name: Y73F8A.2
        Y73F8A.2.1
        CE50060
      Other_name: CELE_Y73F8A.2 Accession_evidence: NDB BX284604
      Public_name: lgc-52
    DB_info: Database: AceView gene 4Q9
        WormQTL gene WBGene00013517
        WormFlux gene WBGene00013517
        NDB locus_tag CELE_Y73F8A.2
        Panther gene CAEEL|WormBase=WBGene00013517|UniProtKB=Q9NA62
          family PTHR18945
        NCBI gene 190669
        RefSeq protein NM_070438.4
        TREEFAM TREEFAM_ID TF315490
        TrEMBL UniProtAcc Q9NA62
        UniProt_GCRP UniProtAcc Q9NA62
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 18 Jan 2008 14:49:34 WBPerson2970 Name_change: CGC_name: lgc-52
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    Allele (146)
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog: WBGene00069432 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147718 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125316 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
      WBGene00034444 Caenorhabditis briggsae From_analysis: Inparanoid_8
      CBOVI.g11603 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7122 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g13830 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g775 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g227 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24754 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3774 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8351 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g13751 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11073 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9694 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_05656.g35357 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07213 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_012670 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10311 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9802 Panagrellus redivivus From_analysis: WormBase-Compara
      chrIV_pilon.g12603 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00100788 Pristionchus pacificus From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-091204-365 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      MGI:103156 Mus musculus From_analysis: EnsEMBL-Compara
            OMA
            Panther
      MGI:95623 Mus musculus From_analysis: EnsEMBL-Compara
            OMA
            Panther
      MGI:95617 Mus musculus From_analysis: EnsEMBL-Compara
            OMA
            Panther
    Paralog (100)
    Structured_description: Automated_description: Predicted to enable transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to contribute to chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in neuron projection and synapse. Expressed in SAADL; SAADR; SAAVL; and SAAVR. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y73F8A.2
    Corresponding_CDS_history: Y73F8A.2:wp124
      Y73F8A.2:wp244
    Corresponding_transcript: Y73F8A.2.1
    Other_sequence (12)
  Experimental_info: RNAi_result: WBRNAi00058386 Inferred_automatically: RNAi_primary
      WBRNAi00021409 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr15853
      Expr1017383
      Expr1161806
      Expr2013132
      Expr2031364
    Drives_construct: WBCnstr00029609
      WBCnstr00042563
    Construct_product: WBCnstr00029609
      WBCnstr00042563
    Microarray_results (21)
    Expression_cluster (69)
    Interaction: WBInteraction000165684
      WBInteraction000166487
      WBInteraction000166488
  Map_info: Map: IV Position: 13.1235
    Positive: Positive_clone: Y73F8A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055090
    WBPaper00058535
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [140923 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods.
  Method: Gene