WormBase Tree Display for Gene: WBGene00013655

WBGene00013655 SMap: S_parent: Sequence: Y105C5B
  Identity: Version: 2
    Name: CGC_name: lgc-19 Paper_evidence: WBPaper00029376
          Person_evidence: WBPerson1430
      Sequence_name: Y105C5B.16
      Molecular_name: Y105C5B.16a
        Y105C5B.16a.1
        CE41038
        Y105C5B.16b
        CE50087
        Y105C5B.16b.1
      Other_name: CELE_Y105C5B.16 Accession_evidence: NDB BX284604
      Public_name: lgc-19
    DB_info: Database: AceView gene 4Q720
        WormQTL gene WBGene00013655
        WormFlux gene WBGene00013655
        NDB locus_tag CELE_Y105C5B.16
        Panther gene CAEEL|WormBase=WBGene00013655|UniProtKB=Q9NAM5
          family PTHR18945
        NCBI gene 190895
        RefSeq protein NM_070504.2
            NM_001307193.1
        TrEMBL UniProtAcc A0A078BTQ8
            Q9NAM5
        UniProt_GCRP UniProtAcc Q9NAM5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 18 May 2007 16:58:23 WBPerson2970 Name_change: CGC_name: lgc-19
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    Allele (148)
    Strain: WBStrain00050945
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog: WBGene00023750 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00061343 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00073596 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00142428 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00103670 Pristionchus pacificus From_analysis: Inparanoid_8
      CBOVI.g11818 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10142 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g6552 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g20616 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP31.g15229 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g15230 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g13269 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g13271 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g13272 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g14918 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g11313 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00206.g6984 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00835.g14480 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g12080 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold171.g637 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00891.g16520 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_22506 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_012132 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09580 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13878 Panagrellus redivivus From_analysis: WormBase-Compara
      chrIV_pilon.g12678 Caenorhabditis elegans From_analysis: WormBase-Compara
      MGI:96282 Mus musculus From_analysis: EnsEMBL-Compara
            PhylomeDB
      MGI:1861899 Mus musculus From_analysis: EnsEMBL-Compara
            PhylomeDB
      RGD:61820 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OMA
            PhylomeDB
    Paralog (100)
    Structured_description: Automated_description: Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y105C5B.16a
      Y105C5B.16b
    Corresponding_CDS_history: Y105C5B.16:wp175
    Corresponding_transcript: Y105C5B.16a.1
      Y105C5B.16b.1
    Associated_feature: WBsf998802
      WBsf1018825
  Experimental_info: RNAi_result: WBRNAi00055193 Inferred_automatically: RNAi_primary
      WBRNAi00066363 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024578
      Expr1158730
    Drives_construct: WBCnstr00029569
    Construct_product: WBCnstr00029569
    Microarray_results (14)
    Expression_cluster (34)
  Map_info: Map: IV Position: 14.5065 Error: 0.000894
    Positive: Positive_clone: Y105C5B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene