WormBase Tree Display for Gene: WBGene00013969

WBGene00013969 SMap: S_parent: Sequence: ZK337
  Identity: Version: 2
    Name: CGC_name: tep-1 Paper_evidence: WBPaper00037645
      Sequence_name: ZK337.1
      Molecular_name (11)
      Other_name: CELE_ZK337.1 Accession_evidence: NDB BX284601
      Public_name: tep-1
    DB_info: Database: AceView gene 1P593
        WormQTL gene WBGene00013969
        WormFlux gene WBGene00013969
        NDB locus_tag CELE_ZK337.1
        Panther gene CAEEL|WormBase=WBGene00013969|UniProtKB=Q7YTU0
          family PTHR11412
        NCBI gene 173367
        RefSeq protein NM_001381276.2
            NM_001381277.1
            NM_001392981.1
        TrEMBL UniProtAcc O46015
            Q7YTU0
            Q7JKM0
        UniProt_GCRP UniProtAcc Q7YTU0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Oct 2010 14:21:30 WBPerson2970 Name_change: CGC_name: tep-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tep
    Allele (135)
    Strain: WBStrain00037132
      WBStrain00055392
    RNASeq_FPKM (74)
    GO_annotation: 00120697
      00120698
      00120699
    Ortholog: WBGene00061188 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038923 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00148562 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00194225 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00128512 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00231732 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10229 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3829 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7354 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8215 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21277 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g12531 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3898 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19760 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g14180 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g29707 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g8390 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7343 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00101.g4351 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00101.g4352 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-tep-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g6967 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_04326.g32656 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19310 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_003582 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06137 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06139 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06142 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5367 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10008300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2998 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248654 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00098289 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259813 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293504 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0041182 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0041181 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0041183 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0041180 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-120215-253 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:21685 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:2445221 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1311287 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00008735 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable endopeptidase inhibitor activity. Predicted to be located in extracellular space. Is an ortholog of human CD109 (CD109 molecule). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK337.1a
      ZK337.1b
      ZK337.1c
    Corresponding_CDS_history: ZK337.1b:wp103
    Corresponding_transcript: ZK337.1a.1
      ZK337.1a.2
      ZK337.1b.1
      ZK337.1c.1
      ZK337.1c.2
    Other_sequence (50)
    Associated_feature (20)
  Experimental_info: RNAi_result: WBRNAi00004926 Inferred_automatically: RNAi_primary
      WBRNAi00115767 Inferred_automatically: RNAi_primary
      WBRNAi00038259 Inferred_automatically: RNAi_primary
      WBRNAi00059345 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1995
      Expr7203
      Expr1017720
      Expr1036247
      Expr1162772
      Expr2017373
      Expr2035510
    Drives_construct: WBCnstr00003645
      WBCnstr00029404
    Construct_product: WBCnstr00029404
    Microarray_results (34)
    Expression_cluster (252)
    Interaction (18)
  Map_info: Map: I Position: 29.0477 Error: 0.059
    Positive: Positive_clone: ZK337 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031003
    WBPaper00037645
    WBPaper00038491
    WBPaper00055090
    WBPaper00062715
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene