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WormBase Tree Display for Gene: WBGene00015326

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Name Class

WBGene00015326SMapS_parentSequenceC02B10
IdentityVersion2
NameCGC_nameivd-1
Sequence_nameC02B10.1
Molecular_nameC02B10.1
C02B10.1.1
CE16798
Other_nameCELE_C02B10.1Accession_evidenceNDBBX284604
Public_nameivd-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:55WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
226 Feb 2007 14:38:18WBPerson2970Name_changeCGC_nameivd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classivd
Allele (29)
StrainWBStrain00001621
RNASeq_FPKM (74)
GO_annotation (14)
OrthologWBGene00039091Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00074580Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00064021Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00143002Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00144150Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00091109Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00206616Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
CBOVI.g11357Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14586Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14566Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6450Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g6452Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g690Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g23755Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g6462Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g6466Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g23863Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8639Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9405Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10175Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1142Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00015.g1030Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ivd-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20942Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00516.g12358Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11844Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013528Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10402Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g6814Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40335200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10353Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00138704Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00262763Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285840Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0035911Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030616-262Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:6186Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1929242Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:2936Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Paralog (22)
Structured_descriptionConcise_descriptionivd-1 encodes an isovaleryl-CoA dehydrogenase; this function has been verified by both sequence homology and direct biochemical assay.Paper_evidenceWBPaper00004637
WBPaper00004732
Curator_confirmedWBPerson1823
WBPerson567
Date_last_updated11 Nov 2008 00:00:00
Automated_descriptionPredicted to enable isovaleryl-CoA dehydrogenase activity. Involved in regulation of response to oxidative stress. Predicted to be located in mitochondrion. Expressed in head. Human ortholog(s) of this gene implicated in isovaleric acidemia. Is an ortholog of human IVD (isovaleryl-CoA dehydrogenase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:14753Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6186)
DOID:9252Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6186)
Molecular_infoCorresponding_CDSC02B10.1
Corresponding_transcriptC02B10.1.1
Other_sequence (77)
Associated_featureWBsf667925
WBsf996432
WBsf1017332
WBsf230050
WBsf230051
WBsf230052
WBsf230053
Experimental_infoRNAi_resultWBRNAi00039385Inferred_automaticallyRNAi_primary
WBRNAi00108514Inferred_automaticallyRNAi_primary
WBRNAi00009964Inferred_automaticallyRNAi_primary
WBRNAi00102599Inferred_automaticallyRNAi_primary
Expr_patternChronogram1081
Expr5102
Expr1015733
Expr1036563
Expr1143502
Expr2012878
Expr2031112
Drives_constructWBCnstr00002460
WBCnstr00028933
Construct_productWBCnstr00028933
Microarray_results (22)
Expression_cluster (149)
Interaction (23)
Map_infoMapIVPosition1.43936Error0.002365
PositivePositive_cloneC02B10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00043054
WBPaper00045076
WBPaper00055090
WBPaper00060459
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene