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WormBase Tree Display for Gene: WBGene00015545

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Name Class

WBGene00015545SMapS_parentSequenceC06G1
IdentityVersion1
NameSequence_nameC06G1.1
Molecular_nameC06G1.1a
C06G1.1a.1
CE27054
C06G1.1b
CE41755
C06G1.1b.1
Other_nameCELE_C06G1.1Accession_evidenceNDBBX284606
Public_nameC06G1.1
DB_infoDatabaseAceViewgeneXR251
WormQTLgeneWBGene00015545
WormFluxgeneWBGene00015545
NDBlocus_tagCELE_C06G1.1
PanthergeneCAEEL|WormBase=WBGene00015545|UniProtKB=A8WFJ7
familyPTHR10504
NCBIgene181720
RefSeqproteinNM_001129626.5
NM_078288.9
TREEFAMTREEFAM_IDTF319188
TrEMBLUniProtAccA8WFJ7
H2KYI4
UniProt_GCRPUniProtAccA8WFJ7
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (61)
RNASeq_FPKM (74)
GO_annotation00005303
00121422
OrthologWBGene00036308Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00063225Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00147633Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00125730Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00090091Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00222280Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3993Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9813Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g9771Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16210Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4638Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24537Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7870Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10452Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13389Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10937Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00664.g13277Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C06G1.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13316Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00001.g72Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02350Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023195Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01818Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22548Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0044300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g20902Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239833Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00256876Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286462Trichuris murisFrom_analysisWormBase-Compara
WBGene00301912Trichuris murisFrom_analysisWormBase-Compara
HGNC:16503Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
RGD:61865Rattus norvegicusFrom_analysisOrthoFinder
Panther
SonicParanoid
RGD:1303179Rattus norvegicusFrom_analysisOrthoFinder
Panther
SonicParanoid
RGD:1306695Rattus norvegicusFrom_analysisOrthoFinder
Panther
SonicParanoid
ParalogWBGene00003812Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007325Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008512Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008652Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015544Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016951Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018403Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020563Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022627Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable lipid binding activity. Predicted to be located in extracellular space. Expressed in excretory system; seam cell; tail hypodermis; and vulval muscle. Is an ortholog of human BPIFC (BPI fold containing family C).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC06G1.1a
C06G1.1b
Corresponding_CDS_historyC06G1.1:wp184
Corresponding_transcriptC06G1.1a.1
C06G1.1b.1
Other_sequenceEX916593.1
JI218027.1
HCC09772_1
HC04664
ES408473.1
Hbac_isotig05209
JI213749.1
ES408468.1
Dviv_isotig23897
HBC01146_1
Associated_feature (18)
Experimental_infoRNAi_resultWBRNAi00001925Inferred_automaticallyRNAi_primary
WBRNAi00010331Inferred_automaticallyRNAi_primary
WBRNAi00027162Inferred_automaticallyRNAi_primary
WBRNAi00024490Inferred_automaticallyRNAi_primary
WBRNAi00039924Inferred_automaticallyRNAi_primary
WBRNAi00110540Inferred_automaticallyRNAi_primary
Expr_patternExpr12012
Expr1018724
Expr1036655
Expr1144000
Expr2000540
Expr2018766
Drives_constructWBCnstr00020074
WBCnstr00028763
Construct_productWBCnstr00028763
Microarray_results (21)
Expression_cluster (220)
Interaction (167)
Map_infoPositivePositive_cloneC06G1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX24.057
ReferenceWBPaper00039361
WBPaper00043805
WBPaper00045871
WBPaper00063946
MethodGene