WormBase Tree Display for Gene: WBGene00015920

WBGene00015920 SMap: S_parent: Sequence: F59E12
  Identity: Version: 2
    Name: CGC_name: eif-3.L Paper_evidence: WBPaper00050195
          Person_evidence: WBPerson26429
      Sequence_name: C17G10.9
      Molecular_name (15)
      Other_name: CELE_C17G10.9 Accession_evidence: NDB BX284602
      Public_name: eif-3.L
    DB_info: Database: AceView gene 2F906
        WormQTL gene WBGene00015920
        NDB locus_tag CELE_C17G10.9
        Panther gene CAEEL|WormBase=WBGene00015920|UniProtKB=Q95QW0
          family PTHR13242
        NCBI gene 24104220
        RefSeq protein NM_001381425.2
            NM_001381424.1
            NM_001306574.2
            NM_001348631.4
            NM_001306575.4
        SwissProt UniProtAcc Q95QW0
        TREEFAM TREEFAM_ID TF101523
        TrEMBL UniProtAcc A0A1N7SYP7
            A0A1N7SYR1
            A0A1N7SYP6
        UniProt_GCRP UniProtAcc Q95QW0
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Nov 2016 11:06:21 WBPerson2970 Name_change: CGC_name: eif-3.L
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: eif
    Allele (28)
    Strain: WBStrain00001212
      WBStrain00040819
    RNASeq_FPKM (74)
    GO_annotation (17)
    Contained_in_operon: CEOP2196
    Ortholog: WBGene00064693 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00029140 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            WormBase-Compara
      WBGene00029139 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00162334 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00110868 Pristionchus pacificus From_analysis: OMA
            WormBase-Compara
      WBGene00126894 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00074952 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00082541 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00143081 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00191467 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00176272 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00066216 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00135461 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00222539 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g7038 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3129 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17287 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18327 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17498 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25604 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g868 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8431 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g28504 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22517 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_16879.g25511 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C17G10.9 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold605.g5600 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01977.g24185 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14356 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008128 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02418 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g416 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20112000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4559 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00128492 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00247046 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00255921 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00266348 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302787 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0036258 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-2138 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:18138 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2386251 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308230 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00015407 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex. Expressed in head and tail. Is an ortholog of human EIF3L (eukaryotic translation initiation factor 3 subunit L). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C17G10.9a
      C17G10.9b
      C17G10.9c
      C17G10.9d
      C17G10.9e
    Corresponding_CDS_history: C17G10.9d:wp107
    Corresponding_transcript: C17G10.9a.1
      C17G10.9b.1
      C17G10.9c.1
      C17G10.9d.1
      C17G10.9e.1
    Other_sequence (122)
    Associated_feature: WBsf665540
      WBsf223069
      WBsf223070
      WBsf223071
      WBsf223072
  Experimental_info: RNAi_result: WBRNAi00010934 Inferred_automatically: RNAi_primary
      WBRNAi00040842 Inferred_automatically: RNAi_primary
      WBRNAi00016128 Inferred_automatically: RNAi_primary
      WBRNAi00000531 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1661
      Expr5291
      Expr1023225
      Expr1036806
      Expr1144888
      Expr2011262
      Expr2029498
    Drives_construct: WBCnstr00002105
      WBCnstr00028454
    Construct_product: WBCnstr00028454
    Microarray_results (27)
    Expression_cluster (135)
    Interaction (25)
  Map_info: Map: II Position: -1.02032
    Positive: Positive_clone: C17G10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027281
    WBPaper00038491
    WBPaper00049828
    WBPaper00050195
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene