WormBase Tree Display for Gene: WBGene00016040

WBGene00016040 SMap: S_parent: Sequence: C24A11
  Identity: Version: 1
    Name: Sequence_name: C24A11.1
      Molecular_name: C24A11.1
        C24A11.1.1
        CE20521
      Other_name: CELE_C24A11.1 Accession_evidence: NDB BX284601
      Public_name: C24A11.1
    DB_info: Database: AceView gene 1F971
        WormQTL gene WBGene00016040
        WormFlux gene WBGene00016040
        NDB locus_tag CELE_C24A11.1
        Panther gene CAEEL|WormBase=WBGene00016040|UniProtKB=P91090
          family PTHR31430
        NCBI gene 172188
        RefSeq protein NM_059184.5
        TREEFAM TREEFAM_ID TF317842
        TrEMBL UniProtAcc P91090
        UniProt_GCRP UniProtAcc P91090
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (12)
    RNASeq_FPKM (74)
    Ortholog: WBGene00123845 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00033418 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060062 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135734 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00069310 Caenorhabditis remanei From_analysis: OMA
            WormBase-Compara
      CBOVI.g10674 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g12741 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1757 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g667 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8240 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5035 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11779 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g12402 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g12406 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8917 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24300 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_14589.g24710 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C24A11.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20485 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00117.g4778 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05460 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_07099 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002588 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004275 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10243400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g905 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00007209 Caenorhabditis elegans From_analysis: Panther
      WBGene00009502 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010906 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011129 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011297 Caenorhabditis elegans From_analysis: Panther
      WBGene00012120 Caenorhabditis elegans From_analysis: Panther
      WBGene00017833 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020400 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00044979 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including AVG; RIM; command interneuron; germ line; and sperm based on proteomic; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C24A11.1
    Corresponding_transcript: C24A11.1.1
    Other_sequence: CJC03288_1
      FG621288.1
      CBC17353_1
    Associated_feature: WBsf983684
      WBsf217652
      WBsf217653
  Experimental_info: RNAi_result: WBRNAi00041044 Inferred_automatically: RNAi_primary
      WBRNAi00029126 Inferred_automatically: RNAi_primary
      WBRNAi00002992 Inferred_automatically: RNAi_primary
      WBRNAi00000929 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025996
      Expr1145083
      Expr2001028
      Expr2019246
    Drives_construct: WBCnstr00028370
    Construct_product: WBCnstr00028370
    Microarray_results (17)
    Expression_cluster (158)
    Interaction (60)
  Map_info: Positive: Positive_clone: C24A11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -0.0264481
  Method: Gene