WormBase Tree Display for Gene: WBGene00016329

WBGene00016329 Evidence: Paper_evidence: WBPaper00013472
  SMap: S_parent: Sequence: C32E12
  Identity: Version: 1
    Name: CGC_name: osr-1 Person_evidence: WBPerson434
      Sequence_name: C32E12.3
      Molecular_name: C32E12.3
        C32E12.3.1
        CE30495
      Other_name: CELE_C32E12.3 Accession_evidence: NDB BX284601
      Public_name: osr-1
    DB_info: Database: AceView gene 1F768
        WormQTL gene WBGene00016329
        WormFlux gene WBGene00016329
        NDB locus_tag CELE_C32E12.3
        NCBI gene 172161
        RefSeq protein NM_059144.7
        TrEMBL UniProtAcc G5EEJ4
        UniProt_GCRP UniProtAcc G5EEJ4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: osr
    Allele (44)
    Strain: WBStrain00003470
      WBStrain00031740
      WBStrain00000175
      WBStrain00004716
    RNASeq_FPKM (74)
    Ortholog: WBGene00056245 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00033721 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00158636 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00157818 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g10534 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g8379 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5475 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11813 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3995 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1969 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9551 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20662 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g15416 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00005.g446 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-osr-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15472 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00108.g4505 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_001922 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05789 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g4724 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10278700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g865 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00131479 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00209622 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00304450 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00260453 Strongyloides ratti From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in ABalpapaap; ABarappaap; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by twenty-one chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C32E12.3
    Corresponding_transcript: C32E12.3.1
    Other_sequence: Oden_isotig16363
      FC809677.1
      Dviv_isotig29674
      SRC02762_1
      SRC00417_1
      Oden_isotig16364
      SR02614
    Associated_feature: WBsf649148
      WBsf219383
      WBsf219384
      WBsf219385
  Experimental_info: RNAi_result (13)
    Expr_pattern: Chronogram395
      Chronogram410
      Expr2781
      Expr2966
      Expr5399
      Expr1028844
      Expr1036989
      Expr1145702
      Expr2014649
      Expr2032882
    Drives_construct: WBCnstr00003931
      WBCnstr00010948
      WBCnstr00011051
      WBCnstr00028154
    Construct_product: WBCnstr00028154
    Microarray_results (18)
    Expression_cluster (186)
    Interaction (155)
    Anatomy_function: WBbtf0321
      WBbtf0322
      WBbtf0323
      WBbtf0324
      WBbtf0325
      WBbtf0326
      WBbtf0327
      WBbtf0328
      WBbtf0329
  Map_info: Map: I Position: -0.275015 Error: 0.003642
    Positive: Positive_clone: C32E12 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4850
        4817
        4687
    Pseudo_map_position
  Reference (22)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene