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WormBase Tree Display for Gene: WBGene00017973

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Name Class

WBGene00017973SMapS_parentSequenceF32A6
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classift
Allele (143)
StrainWBStrain00002530
WBStrain00036344
WBStrain00036504
WBStrain00007576
WBStrain00051699
RNASeq_FPKM (74)
GO_annotation (16)
OrthologWBGene00051699Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00035083Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00130550Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00150921Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00113290Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00224003Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3485Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13171Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18233Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10522Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2495Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9047Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15860Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10897Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g21624Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17679Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00116.g4795Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ift-81Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold527.g3099Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00012.g803Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00530Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024403Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01772Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21414Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0241200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19053Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239565Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00265434Strongyloides rattiFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-040714-3Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:14313Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1098597Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:727862Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
Structured_descriptionConcise_descriptionift-81 encodes an ortholog of the intraflagellar transport component IFT-81 in Chlamydomonas; ift-81 along with ift-74 is involved in growth, chemotaxis, intraflagellar transport and the morphogenesis of cilia; ift-81 binds ift-74 in protein binding assays and co-localizes with ift-74 to the transition zone of cilia in neurons, indicating that ift-81 may form a complex with ift-74.Paper_evidenceWBPaper00030726
Curator_confirmedWBPerson324
Date_last_updated27 Oct 2008 00:00:00
Automated_descriptionEnables microtubule binding activity. Involved in chemotaxis; detection of stimulus involved in sensory perception; and intraciliary transport. Located in non-motile cilium. Expressed in amphid neurons; chemosensory neurons; and phasmid neurons. Human ortholog(s) of this gene implicated in short-rib thoracic dysplasia 19 with or without polydactyly. Is an ortholog of human IFT81 (intraflagellar transport 81).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0080295Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:14313)
Molecular_infoCorresponding_CDSF32A6.2
Corresponding_CDS_historyF32A6.2:wp99
F32A6.2:wp182
F32A6.2:wp191
F32A6.2:wp196
F32A6.2:wp213
Corresponding_transcriptF32A6.2.1
Other_sequenceEL890803.1
BM01040
Associated_featureWBsf648096
WBsf662772
WBsf662773
WBsf1005231
WBsf1005232
Experimental_infoRNAi_resultWBRNAi00031647Inferred_automaticallyRNAi_primary
WBRNAi00046081Inferred_automaticallyRNAi_primary
WBRNAi00046082Inferred_automaticallyRNAi_primary
WBRNAi00014197Inferred_automaticallyRNAi_primary
Expr_patternExpr4638
Expr5927
Expr8322
Expr1026677
Expr1037733
Expr1149971
Expr2012699
Expr2030935
Drives_constructWBCnstr00003106
WBCnstr00012142
WBCnstr00013259
Construct_productWBCnstr00013259
Microarray_results (37)
Expression_cluster (195)
Interaction (17)
Map_infoMapXPosition-5.72774Error0.007898
PositivePositive_cloneF32A6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (12)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene