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WormBase Tree Display for Gene: WBGene00019818

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Name Class

WBGene00019818SMapS_parentSequenceR02C2
IdentityVersion1
NameSequence_nameR02C2.7
Molecular_nameR02C2.7
R02C2.7.1
CE35357
Other_nameCELE_R02C2.7Accession_evidenceNDBBX284605
Public_nameR02C2.7
DB_infoDatabaseAceViewgene5A720
WormFluxgeneWBGene00019818
NDBlocus_tagCELE_R02C2.7
PanthergeneCAEEL|WormBase=WBGene00019818|UniProtKB=Q7KPV8
familyPTHR31664
NCBIgene259611
RefSeqproteinNM_001028893.3
TREEFAMTREEFAM_IDTF317875
TrEMBLUniProtAccQ7KPV8
UniProt_GCRPUniProtAccQ7KPV8
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (24)
RNASeq_FPKM (74)
OrthologWBGene00034518Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00066040Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00074637Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00106612Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00152083Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00144235Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WBGene00145109Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WBGene00156866Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00141674Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151341Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151083Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00095319Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00219495Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00024622Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223493Brugia malayiFrom_analysisWormBase-Compara
CSP26.g12728Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g3032Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP31.g6429Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g6430Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP40.g6356Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g9727Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_IV.g12141Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g17680Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold171.g612Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01322.g20097Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_05362.g34855Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_17506Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_17507Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_012490Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_012498Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g11796Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40197500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g12960Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00080111Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00239650Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263598Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00009535Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00010413Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00011374Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00013647Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015424Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WBGene00016535Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017297Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044514Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in pharyngeal muscle cell based on tiling array and proteomic studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by twenty-five chemicals including tryptophan; rotenone; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4440); NTF2-like domain superfamily; and Domain of unknown function DUF4440.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR02C2.7
Corresponding_transcriptR02C2.7.1
Associated_featureWBsf652439
WBsf999104
WBsf233249
Experimental_infoExpr_patternExpr1012834
Expr1154829
Expr2005311
Expr2023531
Drives_constructWBCnstr00025573
Construct_productWBCnstr00025573
Microarray_resultsA_12_P146585
GPL13394_WBGene00019818
GPL13914_R02C2.7
GPL14144_R02C2.7_301-360_0.957_1_A
GPL19516_CGZ0030591
GPL21109_R02C2.7
GPL8304_CE_WBGene00019818_A
GPL8673_R02C2_7P00048
GPL8673_R02C2_7P00052
GPL8673_R02C2_7P00168
Expression_cluster (149)
InteractionWBInteraction000581120
Map_infoPositivePositive_cloneR02C2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-20.0074
ReferenceWBPaper00062515
MethodGene