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WormBase Tree Display for Gene: WBGene00020586

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Name Class

WBGene00020586SMapS_parentSequenceT19F4
IdentityVersion2
NameCGC_namefrpr-18Person_evidenceWBPerson260
Sequence_nameT19F4.1
Molecular_nameT19F4.1a
T19F4.1a.1
CE28679
T19F4.1b
CE29349
T19F4.1c
CE52203
T19F4.1b.1
T19F4.1c.1
Other_nameCELE_T19F4.1Accession_evidenceNDBBX284605
Public_namefrpr-18
DB_infoDatabaseAceViewgene5H353
WormQTLgeneWBGene00020586
WormFluxgeneWBGene00020586
NDBlocus_tagCELE_T19F4.1
PanthergeneCAEEL|WormBase=WBGene00020586|UniProtKB=G5EEB1
familyPTHR47323
NCBIgene179076
RefSeqproteinNM_001356672.4
NM_072345.7
NM_001356671.3
SwissProtUniProtAccG5EEB1
TREEFAMTREEFAM_IDTF316702
UniProt_GCRPUniProtAccG5EEB1
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
220 Dec 2011 16:46:04WBPerson2970Name_changeCGC_namefrpr-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfrpr
Allele (49)
StrainWBStrain00032724
RNASeq_FPKM (74)
GO_annotation (18)
OrthologWBGene00052249Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00038319Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00153874Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00137278Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00142220Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00161669Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00065546Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00191197Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g2264Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3770Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3334Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8814Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5590Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g19705Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10861Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1177Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g26061Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21534Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00796.g14191Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-frpr-18Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00365.g10208Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_15646Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_018011Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00230Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16891Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50222700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g14538Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00258337Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0035385Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
Paralog (187)
Structured_descriptionConcise_descriptionfrpr-18 encodes, by alternative splicing, two G-protein coupled receptors for the flp-2-encoded peptides SPREPIRFamide (FLP2-A) and LRGEPIRFamide (FLP2-B); T19F4.1B protein has an extension of 30 residues more than T19F4.1A in the intracellular C-terminal region; T19F4.1A/B are probably linked to the G(q) pathway.Paper_evidenceWBPaper00025071
WBPaper00044852
Person_evidenceWBPerson197
Curator_confirmedWBPerson324
WBPerson567
Date_last_updated10 Feb 2016 00:00:00
Automated_descriptionEnables G protein-coupled receptor activity. Involved in G protein-coupled receptor signaling pathway; positive regulation of protein secretion; and sleep. Located in plasma membrane. Expressed in enteric muscle and neurons.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST19F4.1a
T19F4.1b
T19F4.1c
Corresponding_CDS_historyT19F4.1a:wp261
Corresponding_transcriptT19F4.1a.1
T19F4.1b.1
T19F4.1c.1
Other_sequencePPC17509_1
JI174236.1
Oden_isotig19659
Dviv_isotig11885
Acan_isotig11359
Dviv_isotig22130
Dviv_isotig11883
Dviv_isotig11884
Dviv_isotig11882
Associated_featureWBsf1000377
WBsf1000378
WBsf1000379
WBsf1000380
WBsf1000381
WBsf1000382
WBsf1019868
WBsf1019869
WBsf1019870
WBsf231921
Experimental_infoRNAi_resultWBRNAi00072225Inferred_automaticallyRNAi_primary
WBRNAi00053558Inferred_automaticallyRNAi_primary
WBRNAi00018862Inferred_automaticallyRNAi_primary
WBRNAi00000682Inferred_automaticallyRNAi_primary
WBRNAi00113670Inferred_automaticallyRNAi_primary
WBRNAi00103535Inferred_automaticallyRNAi_primary
Expr_pattern (5)
Drives_constructWBCnstr00025028
WBCnstr00038585
Construct_productWBCnstr00025028
Microarray_results (24)
Expression_cluster (111)
InteractionWBInteraction000356676
WBInteraction000559828
WBInteraction000559833
WBInteraction000563597
Map_infoMapVPosition0.389315
PositivePositive_cloneT19F4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00025071
WBPaper00032078
WBPaper00044852
WBPaper00050063
WBPaper00055865
WBPaper00065376
WBPaper00065946
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene