WormBase Tree Display for Gene: WBGene00020626

WBGene00020626 SMap: S_parent: Sequence: T20F5
  Identity: Version: 1
    Name: Sequence_name: T20F5.4
      Molecular_name: T20F5.4
        T20F5.4.1
        CE13822
      Other_name: CELE_T20F5.4 Accession_evidence: NDB BX284601
      Public_name: T20F5.4
    DB_info: Database: AceView gene 1E482
        WormQTL gene WBGene00020626
        WormFlux gene WBGene00020626
        NDB locus_tag CELE_T20F5.4
        NCBI gene 171977
        RefSeq protein NM_058862.6
        TREEFAM TREEFAM_ID TF319231
        TrEMBL UniProtAcc P91479
        UniProt_GCRP UniProtAcc P91479
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (31)
    RNASeq_FPKM (74)
    Ortholog: WBGene00033053 Caenorhabditis briggsae From_analysis: OrthoMCL
            WormBase-Compara
      WBGene00062330 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00140688 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00144914 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130972 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP21.g6745 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4312 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6948 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1905 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16125 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17854 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13392 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12933 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25648 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16429 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-T20F5.4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold627.g6714 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00404.g10861 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08214 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002215 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10156010 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g611 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including germline precursor cell; hyp3; interfacial epithelial cell; intestine; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-five chemicals including 1-methylnicotinamide; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T20F5.4
    Corresponding_transcript: T20F5.4.1
    Other_sequence: CR05265
      CJC11034_1
      CR06139
      CRC00408_1
    Associated_feature: WBsf717481
      WBsf983272
      WBsf219210
      WBsf219211
  Experimental_info: RNAi_result: WBRNAi00035716 Inferred_automatically: RNAi_primary
      WBRNAi00098172 Inferred_automatically: RNAi_primary
      WBRNAi00004237 Inferred_automatically: RNAi_primary
      WBRNAi00053642 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015289
      Expr1038982
      Expr1157201
      Expr2006293
      Expr2024513
    Drives_construct: WBCnstr00025000
    Construct_product: WBCnstr00025000
    Microarray_results (18)
    Expression_cluster (253)
    Interaction (91)
  Map_info: Positive: Positive_clone: T20F5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -1.91245
  Reference: WBPaper00064073
  Method: Gene