WormBase Tree Display for Gene: WBGene00021518

WBGene00021518 SMap: S_parent: Sequence: Y41D4B
  Identity: Version: 2
    Name: CGC_name: hpo-6 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: Y41D4B.16
      Molecular_name: Y41D4B.16
        Y41D4B.16.1
        CE21859
      Other_name: CELE_Y41D4B.16 Accession_evidence: NDB BX284604
      Public_name: hpo-6
    DB_info: Database: AceView gene 4C327
        WormQTL gene WBGene00021518
        WormFlux gene WBGene00021518
        NDB locus_tag CELE_Y41D4B.16
        Panther gene CAEEL|WormBase=WBGene00021518|UniProtKB=Q95Y17
          family PTHR21733
        NCBI gene 176965
        RefSeq protein NM_067699.4
        TREEFAM TREEFAM_ID TF315857
        TrEMBL UniProtAcc Q95Y17
        UniProt_GCRP UniProtAcc Q95Y17
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele (52)
    RNASeq_FPKM (74)
    GO_annotation: 00089550
    Ortholog: WBGene00034316 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00064590 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00217198 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00143919 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g10790 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g21673 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17379 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21747 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g9564 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g15562 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g15563 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4398 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21392 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10607 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00214.g7211 Caenorhabditis sinica From_analysis: WormBase-Compara
      Sp34_40027910 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g9699 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (21)
    Structured_description: Automated_description: Located in membrane raft. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y41D4B.16
    Corresponding_transcript: Y41D4B.16.1
    Other_sequence: FD516601.1
      CSC02372_1
    Associated_feature: WBsf645801
      WBsf227955
  Experimental_info: RNAi_result: WBRNAi00089363 Inferred_automatically: RNAi_primary
      WBRNAi00088693 Inferred_automatically: RNAi_primary
      WBRNAi00088586 Inferred_automatically: RNAi_primary
      WBRNAi00020494 Inferred_automatically: RNAi_primary
      WBRNAi00095231 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010447
      Expr1039407
      Expr1159870
      Expr2012583
      Expr2030819
    Microarray_results (19)
    Expression_cluster (330)
    Interaction: WBInteraction000549513
      WBInteraction000549514
      WBInteraction000549521
      WBInteraction000549528
      WBInteraction000549530
      WBInteraction000549540
      WBInteraction000549541
  Map_info: Map: IV Position: -17.7149 Error: 0.234859
    Positive: Positive_clone: Y41D4B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028789
    WBPaper00037777
    WBPaper00058665
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene