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WormBase Tree Display for Gene: WBGene00021527

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Name Class

WBGene00021527SMapS_parentSequenceY41G9A
IdentityVersion2
NameCGC_nameaakg-3Person_evidenceWBPerson11446
WBPerson11445
Sequence_nameY41G9A.3
Molecular_nameY41G9A.3
Y41G9A.3.1
CE35802
Other_nameCELE_Y41G9A.3Accession_evidenceNDBBX284606
Public_nameaakg-3
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
209 Jul 2010 16:38:16WBPerson2970Name_changeCGC_nameaakg-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaakg
Allele (76)
Possibly_affected_byWBVar02157239
RNASeq_FPKM (74)
GO_annotation00095004
00095005
00095006
00095007
00095008
00095009
OrthologWBGene00025162Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00058229Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00144935Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00126926Caenorhabditis japonicaFrom_analysisOMA
WormBase-Compara
WBGene00109172Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00143909Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00068667Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00133925Caenorhabditis japonicaFrom_analysisTreeFam
CBOVI.g3187Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g12616Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g15503Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18824Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15767Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18409Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5729Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21886Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15197Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12568Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00610.g12756Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-aakg-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold582.g4691Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00652.g14036Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_023840Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_X0094300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g18681Caenorhabditis elegansFrom_analysisWormBase-Compara
SGD:S000003083Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
ZFIN:ZDB-GENE-091204-419Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
ZFIN:ZDB-GENE-060421-6938Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
HGNC:9385Homo sapiensFrom_analysisHieranoid
OMA
Panther
HGNC:9386Homo sapiensFrom_analysisHieranoid
Panther
PhylomeDB
HGNC:9387Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Panther
MGI:1891343Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
Panther
RGD:1308698Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
Panther
ParalogWBGene00011276Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013732Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00020135Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020633Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionaakg-3 encodes one of five C. elegans AMP kinase (AMPK) gamma regulatory subunits.Paper_evidenceWBPaper00031352
Curator_confirmedWBPerson1843
Date_last_updated09 Jul 2010 00:00:00
Automated_descriptionPredicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in monoatomic ion transport. Predicted to be located in cytoplasm and nucleus. Predicted to be part of nucleotide-activated protein kinase complex. Expressed in alimentary muscle; body wall musculature; head neurons; spermatheca; and ventral nerve cord. Human ortholog(s) of this gene implicated in Wolff-Parkinson-White syndrome; hypertrophic cardiomyopathy 6; and lethal congenital glycogen storage disease of heart. Is an ortholog of human PRKAG1 (protein kinase AMP-activated non-catalytic subunit gamma 1); PRKAG2 (protein kinase AMP-activated non-catalytic subunit gamma 2); and PRKAG3 (protein kinase AMP-activated non-catalytic subunit gamma 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0090101Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9386)
DOID:384Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9386)
DOID:0110312Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9386)
DOID:2747Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9386)
Molecular_infoCorresponding_CDSY41G9A.3
Corresponding_CDS_historyY41G9A.3:wp88
Y41G9A.3:wp109
Corresponding_transcriptY41G9A.3.1
Other_sequence (22)
Associated_featureWBsf662573
WBsf662574
WBsf718537
WBsf982136
WBsf1004492
WBsf1004493
WBsf1022550
WBsf235430
Experimental_infoRNAi_resultWBRNAi00056420Inferred_automaticallyRNAi_primary
WBRNAi00037013Inferred_automaticallyRNAi_primary
Expr_patternExpr4940
Expr1018863
Expr1159904
Expr2009058
Expr2027294
Drives_constructWBCnstr00012353
Microarray_results (18)
Expression_cluster (102)
InteractionWBInteraction000455789
WBInteraction000578887
WBInteraction000578889
WBInteraction000581224
Map_infoMapXPosition-12.665
PositivePositive_cloneY41G9AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031003
WBPaper00044832
WBPaper00055090
WBPaper00062543
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene