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WormBase Tree Display for Gene: WBGene00022408

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Name Class

WBGene00022408SMapS_parentSequenceY97E10B
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classsrsx
Allele (19)
RNASeq_FPKM (74)
GO_annotation00090569
00090570
00090571
00090572
00090573
00126535
00126536
00126537
OrthologWBGene00052673Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00030385Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WBGene00148404Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00112798Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00162666Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00148512Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00052674Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00100965Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00223717Brugia malayiFrom_analysisWormBase-Compara
CSP21.g7670Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP28.g14903Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5120Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP38.g13118Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5532Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5533Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP40.g858Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00294.g8659Caenorhabditis angariaFrom_analysisWormBase-Compara
Csp11.Scaffold410.g1048Caenorhabditis tropicalisFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05568Oscheius tipulaeFrom_analysisWormBase-Compara
chrV_pilon.g14855Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238880Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240262Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246484Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249470Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249545Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00111841Pristionchus pacificusFrom_analysisWormBase-Compara
Paralog (44)
Structured_descriptionAutomated_descriptionPredicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Located in non-motile cilium. Expressed in AWBL; AWBR; AWC-OFF; AWCL; and AWCR.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY97E10B.9
Corresponding_transcriptY97E10B.9.1
Other_sequenceTcir_isotig07821
Associated_featureWBsf047507
Experimental_infoRNAi_resultWBRNAi00058693Inferred_automaticallyRNAi_primary
WBRNAi00022503Inferred_automaticallyRNAi_primary
Expr_patternExpr11095
Expr12697
Expr13174
Expr15422
Expr1022621
Expr1162112
Expr2016643
Expr2034831
Marker91
Drives_constructWBCnstr00005558
WBCnstr00007709
WBCnstr00018164
WBCnstr00018719
WBCnstr00021137
WBCnstr00024246
Construct_productWBCnstr00018164
WBCnstr00024246
Microarray_results (18)
Expression_cluster (29)
Map_infoMapVPosition0.965522Error0.002014
PositivePositive_cloneY97E10BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00024671
WBPaper00028910
WBPaper00030504
WBPaper00031175
WBPaper00032896
WBPaper00044991
WBPaper00056672
WBPaper00059878
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene