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WormBase Tree Display for Gene: WBGene00029948

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Name Class

WBGene00029948SMapS_parentSequencecb25.fpc1402c
IdentityVersion2
NameCGC_nameCbr-arr-1From_analysisInferred_from_orthology
Sequence_nameCBG08085
Molecular_nameCBG08085a
CBG08085a.1
CBP29941
CBG08085b
CBP01981
CBG08085b.1
Other_nameCBG_08085Accession_evidenceNDBHE600971
Public_nameCbr-arr-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-arr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classarr
RNASeq_FPKMWBls:000000213.0067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.3829From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
20.3705From_analysisRNASeq.briggsae.WBls:0000002.control_mean
29.722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
16.3048From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
17.3438From_analysisRNASeq.briggsae.WBls:0000002.control_median
19.3541From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000344.6222From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
56.5076From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
68.393From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
52.8941From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
55.3031From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000458.2234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
63.4339From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
68.6444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
62.2319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
65.292From_analysisRNASeq.briggsae.WBls:0000004.control_mean
67.0174From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
70.3427From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.790009From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
21.7735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.87418From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.1459From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.1721From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.2506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.06239From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003513.6698From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.6517From_analysisRNASeq.briggsae.WBls:0000038.control_mean
11.7844From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.8265From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
14.4113From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
4.62658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.74232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004111.0585From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.6974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
12.154From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.6107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.8165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.1095From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
10.7593From_analysisRNASeq.briggsae.WBls:0000041.control_mean
12.1381From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.5788From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
7.74285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.25867From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
3.53628From_analysisRNASeq.briggsae.WBls:0000063.control_mean
3.80427From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.52523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
6.09321From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.16475From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.51134From_analysisRNASeq.briggsae.WBls:0000063.control_mean
9.38668From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010113.0067From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.7345From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
13.4602From_analysisRNASeq.briggsae.total_over_all_stages.control_median
22.5014From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133362
OrthologWBGene00000195Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00060199Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00149199Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00121774Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CSP21.g12175Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10940Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13378Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6288Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g6148Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g55Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g19042Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7305Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g11226Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-arr-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold412.g1092Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00225.g7461Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_03175Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_022237Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13070Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14595Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0013400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00224589Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g18355Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239441Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00305127Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00258058Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00292200Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in signal transduction. Is an ortholog of C. elegans arr-1. In C. elegans, arr-1 is involved in positive regulation of growth rate.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08085a
CBG08085b
Corresponding_CDS_historyCBG08085:bp194
Corresponding_transcriptCBG08085a.1
CBG08085b.1
Other_sequence (20)
Experimental_infoExpr_patternExpr1068034
Microarray_resultsGPL8303_CB6_WBGene00029948_A
GPL8303_CB6_WBGene00029948_B
GPL14143_CBG08085_922-981_0.817_4_B
GPL14143_CBG08085_1035-1094_0.833_1_C
GPL14143_CBG08085_1192-1251_0.801_8_A
MethodGene