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WormBase Tree Display for Gene: WBGene00053340

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Name Class

WBGene00053340SMapS_parentSequenceCrem_Contig1
IdentityVersion3
NameCGC_nameCre-ldh-1From_analysisInferred_from_orthology
Sequence_nameCRE02250
Molecular_nameCRE02250
CRE02250.1
RP18041
Other_namecr01.sctg2.wum.132
Public_nameCre-ldh-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:44WBPerson2970Name_changeCGC_nameCre-ldh-1
303 Jul 2008 11:44:42WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE02250
Other_namecr01.sctg2.wum.132
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classldh
RNASeq_FPKMWBls:000000413.6954From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
16.0352From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
18.3751From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:0000027113.97From_analysisRNASeq.remanei.WBls:0000027.control_mean
119.055From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
122.076From_analysisRNASeq.remanei.WBls:0000027.control_median
125.096From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
165.689From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
46.0393From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038139.594From_analysisRNASeq.remanei.WBls:0000038.control_mean
179.719From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
190.171From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
48.8925From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041152.348From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
158.86From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
159.497From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
160.368From_analysisRNASeq.remanei.WBls:0000041.control_median
161.239From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
164.635From_analysisRNASeq.remanei.WBls:0000041.control_mean
170.864From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
184.999From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:0000101125.426From_analysisRNASeq.remanei.total_over_all_stages.control_mean
151.275From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00148553
00148554
00148555
00148556
00148557
00148558
OrthologWBGene00002262Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00026058Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00160077Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00150885Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00133591Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00223600Brugia malayiFrom_analysisWormBase-Compara
WBGene00247426Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00304582Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g6338Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6452Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4612Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17032Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21802Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16858Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9445Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5397Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15302Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23767Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22437Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_08324.g21439Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ldh-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold458.g1416Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00086.g3844Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09352Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005569Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02646Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g1312Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20312830Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g6020Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267362Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00302564Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00063502Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable L-lactate dehydrogenase activity. Predicted to be involved in carboxylic acid metabolic process. Predicted to be located in cytoplasm. Is an ortholog of C. elegans ldh-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE02250
Corresponding_transcriptCRE02250.1
Other_sequence (188)
Experimental_infoExpr_patternExpr1106032
Microarray_resultsGPL14146_CRE02250_757-816_0.909_6_A
MethodGene