WormBase Tree Display for Gene: WBGene00064940

WBGene00064940 SMap: S_parent: Sequence: Crem_Contig29
  Identity: Version: 3
    Name: CGC_name: Cre-lron-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE19711
      Molecular_name: CRE19711
        CRE19711.1
        RP16918
      Other_name: cr01.sctg54.wum.24
      Public_name: Cre-lron-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:01 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE19711
                Other_name: cr01.sctg54.wum.24
        3 09 Dec 2011 15:52:14 WBPerson2970 Name_change: CGC_name: Cre-lron-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lron
    RNASeq_FPKM: WBls:0000004 2.32917 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        2.74009 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        3.15101 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (52)
      WBls:0000027 4.11501 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        7.35253 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        7.59174 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        7.79903 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        8.00632 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        9.69703 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 4.80484 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        5.08102 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        5.15886 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
            RNASeq.remanei.WBls:0000038.control_median
        5.27936 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.630903 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.645889 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.845269 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.64409 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1.84538 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.44291 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.9913 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        3.51602 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (11)
      WBls:0000101 2.38604 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        2.84706 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog: WBGene00022789 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038501 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00141185 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00124014 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00106686 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00192085 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00227793 Brugia malayi From_analysis: WormBase-Compara
      WBGene00241453 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g1732 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g413 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9332 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4648 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18135 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26167 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g18123 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4090 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9490 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g15977 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00901.g14846 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g20162 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20585 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00073.g3378 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08533 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017034 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02681 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3906 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50242700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15214 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00265843 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286583 Trichuris muris From_analysis: WormBase-Compara
    Paralog (13)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; Leucine rich repeat; and Leucine-rich repeat, typical subtype. Is an ortholog of C. elegans lron-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE19711
    Corresponding_transcript: CRE19711.1
    Other_sequence (13)
  Experimental_info: Expr_pattern: Expr1115381
    Microarray_results: GPL14146_CRE19711_1197-1256_0.794_33_C
      GPL14146_CRE19711_1321-1380_0.704_79_A
      GPL14146_CRE19711_1434-1493_0.934_1_B
  Method: Gene